Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01294 ATGGCGTCGGCTTCTCCTTCTCCCGATTCTTCCCCCTCTGCAGTGCCACCAACTTCTGCGAATAACACAACACCACCACCTTCTTCACCTTCATCTACAAATTCTTCTAAGCCACCTCCTCCATCTCCTAACCCTTCAGCTAAACCTCCTTCTCCGGCAGTGCCTTCAACTCCGCCTCCTTCTCCGTCTATTTCTCCTCCGCCGCCATCACCACCGGCATCTCCTCCACCTTCAACTCCCACAGCCCCTGCTCCAAATACTACCGCACCAACCCCTCCGAAATCATCCCCACCACCTCCATTGGCTGCTTCACCACCAAATCCTTCACCTCCTCCTGCAGAAAATCCTCCTCCCTCACCTATTTCTCCAATTCCTCCTCCTCCGGTCAATAACTCAACACCACCGCCGTCTGGTAATCCTTCTCCGCCACGGGGAAAGCCACCGGAAAGTACTCCTTCGCTCCCTTCACCTGCACCAACTCCATCAATTTCTAAGTCTCCCCCTTCCAAAACGCCTCCAACTCCTTCAGTCCCTCCTCGAAAGTCTTCTCATGCTCCTCCACATAATGCATCTGCAGCTAACAGGCCCCCTTCACCCCTACCCTCTTTTCCACCGGGATCGCCCACTGGCAGATCATCTAATCATAGAAATACATCCACAAACAGCGCACCTTCAGGAGGAACAAATAATGGACCATTCGCAGTTATTGGCATTATAATTGGCTTTGTTGTCCTCAGCTTTCTTGTCATGGCGGTGTGGTTTGTATGGAAACGGAAGAGGAAGGAAGCAAGACGGAAAGTTGGTTATACTACGCCTTCCCCTTATGCTTCATCTCATAACTCAGGCGCAAGGTTCTTAAAGCAACAGTCTTCCCTTTCTTATAATAGTGGAGGTAGTGATTTGACGTATTCACCATCAGAACCAGGTGGACTAAGTGGTTCAAGATCGTGGTTTACATATGAAGAGCTTGTCCAAGCAACAGATGGGTTTTCGGCACAAAATCTGCTGGGTGAAGGTGGATTTGGTTGTGTCTACAAAGGCTTTCTCATGGATGGAAGAGCAGTGGCTGTGAAACAGCTCAAAGATGGAGGTGGGCAAGGGGAGCGTGAGTTTAGAGCAGAAGTTGAAACTATTAGCCGAGTACATCATCGCCACCTTGTTTCCTTGGTGGGCTACTGTATATCTGAGCATCAGAGATTGCTTGTCTATGACTATGTTCCCAACAATACCCTTCATTACCATCTCCATGATCAAAACAGGCCAGTTATGGATTGGGCTACAAGAGTGAAGGTTGCAGTTGGTGCAGCACGTGGAATAGCTTACCTACATGAAGACTGCCATCCACGCATTATTCACCGAGACATAAAGTCATCAAACATCCTTCTTGATAACAACTTTGAAGCTCAAGTTTCCGACTTTGGGCTTGCAAAATTAGCAATGGATTCATTTACACATGTAACCACACGAGTGATGGGGACCTTTGGGTACATGGCACCAGAATATGCAACAAGTGGTAAACTGACTGAAAAGTCAGATGTTTATTCATTTGGGGTTGTGCTTTTGGAGCTAATTACAGGTCGGAAGCCTGTAGATGCCTCTCAGCCTACTGGTGATGAGAGCCTGATTGAATGGGCTCGACCTCTTTTGAATCAAGTGCTTGATAATGAAGACTATGATATACTGGTGGATCCACGACTCGAGAGGAACTATAATAGAAATGAAATGTTTCGGATGATAGAGGCTGCAGCTGCCTGTGTGCGCCACTCTGCAGCAAAAAGACCACGAATGAGTCAGGTCGCCAGAGCTTTGGAGTCGACAGATGAGTTTTCGGATCTCTGTAATGGAATAAAACCTGGCCAGAGTACAACCTTTAATCCCTCACCACCATCTGCACAAGTCAGAATGTTTCAAAGGATGGTTTTTGGTGGGGCCAGTCAAGATTTCAGTTCCAGTTTCTTTAACGATTCTCAGAGTAGCTGGAGAAGCAGAGACCAGAAGGACTCAACACAACATGATGATCTCCCAAAATAA 2031 0.4756 MASASPSPDSSPSAVPPTSANNTTPPPSSPSSTNSSKPPPPSPNPSAKPPSPAVPSTPPPSPSISPPPPSPPASPPPSTPTAPAPNTTAPTPPKSSPPPPLAASPPNPSPPPAENPPPSPISPIPPPPVNNSTPPPSGNPSPPRGKPPESTPSLPSPAPTPSISKSPPSKTPPTPSVPPRKSSHAPPHNASAANRPPSPLPSFPPGSPTGRSSNHRNTSTNSAPSGGTNNGPFAVIGIIIGFVVLSFLVMAVWFVWKRKRKEARRKVGYTTPSPYASSHNSGARFLKQQSSLSYNSGGSDLTYSPSEPGGLSGSRSWFTYEELVQATDGFSAQNLLGEGGFGCVYKGFLMDGRAVAVKQLKDGGGQGEREFRAEVETISRVHHRHLVSLVGYCISEHQRLLVYDYVPNNTLHYHLHDQNRPVMDWATRVKVAVGAARGIAYLHEDCHPRIIHRDIKSSNILLDNNFEAQVSDFGLAKLAMDSFTHVTTRVMGTFGYMAPEYATSGKLTEKSDVYSFGVVLLELITGRKPVDASQPTGDESLIEWARPLLNQVLDNEDYDILVDPRLERNYNRNEMFRMIEAAAACVRHSAAKRPRMSQVARALESTDEFSDLCNGIKPGQSTTFNPSPPSAQVRMFQRMVFGGASQDFSSSFFNDSQSSWRSRDQKDSTQHDDLPK 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01294 676 Pfam Protein tyrosine and serine/threonine kinase 333 602 IPR001245 GO:0004672|GO:0006468
Accr1g01294 676 ProSitePatterns Protein kinases ATP-binding region signature. 336 358 IPR017441 GO:0005524
Accr1g01294 676 SUPERFAMILY Protein kinase-like (PK-like) 308 604 IPR011009 -
Accr1g01294 676 Gene3D Transferase(Phosphotransferase) domain 1 406 614 - -
Accr1g01294 676 MobiDBLite consensus disorder prediction 1 18 - -
Accr1g01294 676 MobiDBLite consensus disorder prediction 207 228 - -
Accr1g01294 676 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 244 649 IPR047117 -
Accr1g01294 676 ProSitePatterns Serine/Threonine protein kinases active-site signature. 450 462 IPR008271 GO:0004672|GO:0006468
Accr1g01294 676 SMART serkin_6 330 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01294 676 MobiDBLite consensus disorder prediction 660 676 - -
Accr1g01294 676 PRINTS Proline rich extensin signature 1 18 - -
Accr1g01294 676 PRINTS Proline rich extensin signature 19 35 - -
Accr1g01294 676 PRINTS Proline rich extensin signature 37 54 - -
Accr1g01294 676 PRINTS Proline rich extensin signature 55 80 - -
Accr1g01294 676 FunFam proline-rich receptor-like protein kinase PERK8 406 618 - -
Accr1g01294 676 MobiDBLite consensus disorder prediction 192 206 - -
Accr1g01294 676 ProSiteProfiles Protein kinase domain profile. 330 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01294 676 MobiDBLite consensus disorder prediction 651 676 - -
Accr1g01294 676 MobiDBLite consensus disorder prediction 1 228 - -
Accr1g01294 676 FunFam Proline-rich receptor-like protein kinase PERK8 302 405 - -
Accr1g01294 676 MobiDBLite consensus disorder prediction 31 182 - -
Accr1g01294 676 Gene3D Phosphorylase Kinase; domain 1 309 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01294 Accr-Chr1 39119825 39125736 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01294 204 665 Trihelix Transcription Factor Family AT5G38560 66.737 0.0 644
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Accr1g01294 PK_Tyr_Ser-Thr 2.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01294 - - gmx:100784873 709.909