Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01271 ATGGCCAGACCACAACAGAGATATCGAGGCGTCCGGCAAAGGCATTGGGGATCATGGGTCTCTGAAATCCGACACCCTCTATTGAAGACGAGGATATGGCTTGGTGCATTTGAAACTGCAGAAGATGCAGCCAGAGCTTACGATGAAGCAGCGAGGCTGATGTGTGGTCCAAGAGCAAGAACCAATTTCCCTTACAACCCCAGTGCGTCTCAATCGTCATCTTCTAAGCTACTCTCTGCAACCCTCACTGCTAAACTTCATAGATGTTATATGGCTTCGCTTCAAATGACCAGACCCACGGTACCCGAACCTGTGCGAGCAACTTCTTCTCCAAATGTTGTGTCCACGAGCACAAGAAACTCTTCCTCTTTGAAAAGCAGAGGAACCAATATTACAATGTTGGGAGAGAAGAAAGCAAAGGAGGAGGCTGAAGAATCAGAGGCAAAGTGGGGTGTGAAGAAGGTGAAGGTGGAAAGTGGTGAGCAATTAGGGATGGAAAAAGCTGCCGACAATAGAGAGAGAAAGTAG 528 0.4792 MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGAFETAEDAARAYDEAARLMCGPRARTNFPYNPSASQSSSSKLLSATLTAKLHRCYMASLQMTRPTVPEPVRATSSPNVVSTSTRNSSSLKSRGTNITMLGEKKAKEEAEESEAKWGVKKVKVESGEQLGMEKAADNRERK 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01271 175 SUPERFAMILY DNA-binding domain 7 66 IPR016177 GO:0003677
Accr1g01271 175 MobiDBLite consensus disorder prediction 102 130 - -
Accr1g01271 175 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700|GO:0006355
Accr1g01271 175 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
Accr1g01271 175 Pfam AP2 domain 7 56 IPR001471 GO:0003700|GO:0006355
Accr1g01271 175 CDD AP2 6 66 IPR001471 GO:0003700|GO:0006355
Accr1g01271 175 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 6 136 - -
Accr1g01271 175 FunFam Ethylene-responsive transcription factor 2 6 65 - -
Accr1g01271 175 Gene3D AP2/ERF domain 6 65 IPR036955 GO:0003700|GO:0006355
Accr1g01271 175 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700|GO:0006355
Accr1g01271 175 SMART rav1_2 7 70 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01271 Accr-Chr1 37116864 37117391 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01271 1 94 AP2-EREBP Transcription Factor Family AT5G25190 92.553 2.21e-63 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr1g01271 AP2 4.5e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01271 - - qsu:111996273 195.282