Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01258 ATGAGGATGAGCTGTAATGGATGTCGTGTTCTCAGAAAAGGTTGCAGTGAAGATTGTAGCATCAGACCTTGCTTGCAGTGGATCAAATCGCCGGAATCTCAAGCTAACGCTACCGTGTTCCTCGCTAAGTTCTACGGCCGAGCTGGCCTCTTGAATCTCATCAACGCTGGCCCTCAACACCTTCGTCCTGCTATTTTTCGGTCTCTGCTTTACGAAGCATGCGGGCGGATACTTAACCCGATTTATGGGTCTGTGGGTCTTTTATGGTCGGGGAACTGGCCGCGGTGTCAGGCCGCCGTGGAAGCGATTCTGAAGGGTGATCCGATTACTCCGATCAACTCCGATGCTGCCGAGAGTGGGCAGGGTCCACCGCTGAAGCCTTACGACATACGTCATGTGAACAAGGACAAGAACTCGACCGAGTCGAACGATTCCCAACGAGTCAAGTCCAACTCACGGGTCAAGCGATCCGCCGGGAAGACCAAGAAGACGAACAAGGGGACCGAGTTAAAGTCCGCTGAACCGGAAGAACCGCGCAGGGGATGCACAGTGTGCTGTGCGACCGTTGATGAGCCGGAGAACCGGTCCGTAAGCCACGAGTCATCGCTGAGCCACCAGTCCGAGGAAGCGCAGCCGAAAGTGGCGTCGGCGGAAGGGGATAGTAAAGAGAGTGAGAGCATGGTGTCAGAAGAGACCGCCGAGACTTCTATGCTCTTCCGGGATGAGCCGGAATCAACACCCAAACAGAGCGACGGAGCCGATGGGGCCGACCTGGGGCTGGAGCTAACGCTGGGGATCAAACCGGTGGCACGTGAGGCTCACGTGATACCGGTCAAGAAGAGAAAGATAGAATTTCAATTTCAAGACTCAGCTAGCGACTCGACGGCTAATAAGAAAGTAGCAAGAGTAGCAAGCGTGAATCTGGGGCTCGAATGCTCGGCTTAA 945 0.5481 MRMSCNGCRVLRKGCSEDCSIRPCLQWIKSPESQANATVFLAKFYGRAGLLNLINAGPQHLRPAIFRSLLYEACGRILNPIYGSVGLLWSGNWPRCQAAVEAILKGDPITPINSDAAESGQGPPLKPYDIRHVNKDKNSTESNDSQRVKSNSRVKRSAGKTKKTNKGTELKSAEPEEPRRGCTVCCATVDEPENRSVSHESSLSHQSEEAQPKVASAEGDSKESESMVSEETAETSMLFRDEPESTPKQSDGADGADLGLELTLGIKPVAREAHVIPVKKRKIEFQFQDSASDSTANKKVARVASVNLGLECSA 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01258 314 MobiDBLite consensus disorder prediction 129 151 - -
Accr1g01258 314 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Accr1g01258 314 MobiDBLite consensus disorder prediction 162 178 - -
Accr1g01258 314 Pfam Lateral organ boundaries (LOB) domain 4 102 IPR004883 -
Accr1g01258 314 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 237 - -
Accr1g01258 314 MobiDBLite consensus disorder prediction 113 180 - -
Accr1g01258 314 PIRSF AS2 1 305 IPR017414 -
Accr1g01258 314 MobiDBLite consensus disorder prediction 215 229 - -
Accr1g01258 314 MobiDBLite consensus disorder prediction 193 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01258 Accr-Chr1 36392678 36393719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01258 1 283 AS2 family AT3G02550 57.951 7.37e-108 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Accr1g01258 LOB 9.1e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01258 - - qsa:O6P43_005610 380.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g01258 1 36392678 36393719 Accr1g01258 1 36392678 36393719 ECH