Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01207 ATGCAACTTCATTTCAGCGTCTCTGTTTTGTTTTTTATCATTTCGATCACCCTTTATCAAATTCAAATTTGCTTCTGTGATGATTATGAGGCATCCTGCAGCTCTTTCTTTGATTGTGGAAATATCAAGAACATTAGCTATCCTTTCTGGGGATCGGAAAGACCAGAGCATTGTGGCCGCCCAGAATTTAAATTAGATTGCCATGATGATTATGCAGAAATCACCATCATGTCTTACAGCTATCGAGTTCTTCAAGTCAACTATTCTGATCACAGTCTTAGAGTTGTGAGAACTGACTTCTGGAATAATTCTTGTCCAACCAATTTCAAAAACAATTCCATAGATTTCACTTTGTTCGAATATCGTATGGACTCCCATAACCTGACACTGTACTACGATTGTCCTCCCCCTCCATTTTCTCTCCCATATAACCGTTCCATTCAGTTTAATTGCAGTGAATATGGTACCGAAGTGGTCAGCTATTCCCTTACCGAGGTCCCTGAAATTGATGCGACAACAGGGACCTGCGCATCTACTCTCATCGTTCCAATTTTGGAGTCACAAGTCAGAATTCTAGAGGAAAATTCAACCGTGGAAAATCTGAAGGCTGCTATTGATGAAGGTTTTGGTTTGGTATGGGAGGCAGATAAAGGTCTGTGTTATGACTGTCGAAATTCTGGTGGACAATGCGGTTATAACACAAGCTCAAGTGAATTCACTTGCTATTGTAGAGACGGACCTGTTCCATCGACATGTAGATCAAGATCAACTAAGAAGCTGGGTTCGCGACTTCCTATAGCCATTTCAGCCGGAGCTGGTGGGCTTGCTCTAATCTCGGTTTTGATTATTTATAATCGCAAGAAGCATTTCAGAACAGAAAATGGCAAAGTCTTCAGAGGGGGAAGAGATTATCATGATCACAATCTTGAATCCCTCATAAGAAACGATGGCTCTTTGGCACCAAAGAAATATAGTTATTCAGAAGTTCAAAGAATGACAAAATTATTTTCAAAAAAATTGGGAAAGGGAGGGTATGGTGTTGTATACAAAGGAAGCCTACCTGATGGTCGCCGTGTGGCAGTTAAAGTGATAAGGGAATCTAAAGGAAGTGGAGAAGAATTTATAAATGAAGTTGCAAGTATCAGTAGAACCTCCCATGTCAATATAGTCACTCTTCTGGGATTTTGCTTTGAAAGGAACAAAAGAGTACTAATCTATGAATACATGTCAAATGGTTCCTTGGATAATTTCATTTATAAGAGAGGATCTCCAAATGCTTTTTGTACCTTGGAGTGGAAGCTATTGTACCAAGTTGCTATCGGCATTGCTCGTGGGCTTGAGTACTTGCATCGCGGTTGTAACACGAGAATTTTGCACCTTGATATCAAACCCCAAAACATCCTCTTGGACGAAGATTTCTCCCCCAAAATATCTGATTTTGGATTAGCTAAAATATGTAAAAAGAGAGAGAGTATTGTGTCAGGACTGGGCACAAGAGGAACAATAGGGTTCATTGCACCAGAACTATTCAACAGAGCATTTGGTGGTGTTTCTCACAAAGCTGATGTCTATAGCTATGGCATGTTAGTCCTTGAAATAGTTGGAGGAAGGAAGAATTATGACAGTGGAGGCTCACAAACTGATGAACAGTATTTTCCAGATTGGATTTATAAGGATCTTGAACATGGTAAGCATCCAGCTAGTTCTGTAGTAATCACAGTGGAAGATGATGAAATGGTAAGGAAGATGACTTTAGTGAGTCTATGGTGTATTCAAACAAATCCATTTGATAGACCAGCTATGAGTAAAGTGGTAGAAATGTTAGAAGGATCCCTTCAATCGTTATCAGTCCCACCAAAACCATCCCTTCAATATCCTACAAAATCACCAGTTACACAATTGTCAAGTGGATCTTCCCAAGAAGTAACTCAGACAAATTCAATAACCAGTTAA 1953 0.3963 MQLHFSVSVLFFIISITLYQIQICFCDDYEASCSSFFDCGNIKNISYPFWGSERPEHCGRPEFKLDCHDDYAEITIMSYSYRVLQVNYSDHSLRVVRTDFWNNSCPTNFKNNSIDFTLFEYRMDSHNLTLYYDCPPPPFSLPYNRSIQFNCSEYGTEVVSYSLTEVPEIDATTGTCASTLIVPILESQVRILEENSTVENLKAAIDEGFGLVWEADKGLCYDCRNSGGQCGYNTSSSEFTCYCRDGPVPSTCRSRSTKKLGSRLPIAISAGAGGLALISVLIIYNRKKHFRTENGKVFRGGRDYHDHNLESLIRNDGSLAPKKYSYSEVQRMTKLFSKKLGKGGYGVVYKGSLPDGRRVAVKVIRESKGSGEEFINEVASISRTSHVNIVTLLGFCFERNKRVLIYEYMSNGSLDNFIYKRGSPNAFCTLEWKLLYQVAIGIARGLEYLHRGCNTRILHLDIKPQNILLDEDFSPKISDFGLAKICKKRESIVSGLGTRGTIGFIAPELFNRAFGGVSHKADVYSYGMLVLEIVGGRKNYDSGGSQTDEQYFPDWIYKDLEHGKHPASSVVITVEDDEMVRKMTLVSLWCIQTNPFDRPAMSKVVEMLEGSLQSLSVPPKPSLQYPTKSPVTQLSSGSSQEVTQTNSITS 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01207 650 ProSiteProfiles Protein kinase domain profile. 334 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01207 650 FunFam PR5-like receptor kinase 409 620 - -
Accr1g01207 650 Gene3D Transferase(Phosphotransferase) domain 1 409 617 - -
Accr1g01207 650 Pfam Wall-associated receptor kinase C-terminal 161 246 IPR032872 -
Accr1g01207 650 Pfam Wall-associated receptor kinase galacturonan-binding 33 97 IPR025287 GO:0030247
Accr1g01207 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Accr1g01207 650 MobiDBLite consensus disorder prediction 615 650 - -
Accr1g01207 650 PANTHER RUST RESISTANCE KINASE LR10-RELATED 316 629 IPR045874 GO:0004672
Accr1g01207 650 SUPERFAMILY Protein kinase-like (PK-like) 318 609 IPR011009 -
Accr1g01207 650 ProSitePatterns Protein kinases ATP-binding region signature. 340 362 IPR017441 GO:0005524
Accr1g01207 650 Gene3D Phosphorylase Kinase; domain 1 311 408 - -
Accr1g01207 650 SMART serkin_6 334 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01207 650 FunFam serine/threonine-protein kinase PBS1-like 304 408 - -
Accr1g01207 650 Pfam Protein kinase domain 337 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01207 Accr-Chr1 35283682 35286783 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01207 3 645 Receptor kinase-like Gene Family AT5G38260 44.172 0.0 531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Accr1g01207 Pkinase 3.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01207 - - pcin:129293521 776.548