Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01206 ATGACAAAATCATTTTCAAACAAATTGGGGGAGGGAGGGTATGGTGTTGTATACAAAGCAAGCCTACCTGATGGTCGTCTTGTGGCAGTTAAAGTGATAAGGGAATCTAAAGGAAGTGGAGAAGAATTTCTAAATGAAGTTGCAAGTATCAGCAGAACCTCCCATGTCAATATAGTCACTCTCCTAGGATTTTGCTTCGAGAGGAACAAAGGAGTACTAATCTATGAATACATGTCAAATGGTTCCTTGGATAATTTCATTTATAAAAGAGGATCTCCAAATGCTTTTTGTACCTTGGAGTGGAAGGTGTTGTACCAAGTTGCTATCGGCATTGCTCGTGGGCTTGAGTACTTGCATCGGGGTTGTAACACGAGAATTTTGCACCTTGATATCAAACCTCAAAACATCCTCTTGGACGAAGATTTCTCCCCCAAAATATCTGATTTTGGATTAGCTAAAATATGTCAAAAGAGAGAGAGTATCGTGTCAATACTGGGCACAAGAGGAACAATAGGGTTCATTGCACCAGAACTATTCAACAGAGCATTTGGTGGTGTTTCTCACAAAGCTGATGTCTATAGCTATGGCATGTTAGTCCTTGAAATGGTTGGAGGAAGGAAGAATTATGACAGTGGAGGCTCACAAACCGAAGAACAGTATTTTCCAGATTGGATTCATAAGGATCTTGAACATGGTAAGCATCCAGCTAGTTCTGTAGTAATCACAGTGGAAGATGATGAAATGGTAAGGAAGATGACTTTAGTGAGTCTATGGTGTATTCAAACAAATCCATTTGATAGACCAGCTATGAGTAAAGTGGTAGAAATGTTAGAAGGACCTCTTCAATCGTTATCAGTTCCTCCAAAGCCATCCCTTCAATGTCCTACAAAATCACCAGTTACACAATTGTCAAGTGGATCTTCCCAAGAAGTGACTCGGACAAATTCAATATCCAATTAA 960 0.3969 MTKSFSNKLGEGGYGVVYKASLPDGRLVAVKVIRESKGSGEEFLNEVASISRTSHVNIVTLLGFCFERNKGVLIYEYMSNGSLDNFIYKRGSPNAFCTLEWKVLYQVAIGIARGLEYLHRGCNTRILHLDIKPQNILLDEDFSPKISDFGLAKICQKRESIVSILGTRGTIGFIAPELFNRAFGGVSHKADVYSYGMLVLEMVGGRKNYDSGGSQTEEQYFPDWIHKDLEHGKHPASSVVITVEDDEMVRKMTLVSLWCIQTNPFDRPAMSKVVEMLEGPLQSLSVPPKPSLQCPTKSPVTQLSSGSSQEVTRTNSISN 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01206 319 ProSitePatterns Serine/Threonine protein kinases active-site signature. 126 138 IPR008271 GO:0004672|GO:0006468
Accr1g01206 319 PIRSF ILK 2 286 - -
Accr1g01206 319 SMART serkin_6 3 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01206 319 ProSitePatterns Protein kinases ATP-binding region signature. 9 31 IPR017441 GO:0005524
Accr1g01206 319 SUPERFAMILY Protein kinase-like (PK-like) 5 277 IPR011009 -
Accr1g01206 319 Gene3D Phosphorylase Kinase; domain 1 1 77 - -
Accr1g01206 319 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 298 IPR045874 GO:0004672
Accr1g01206 319 MobiDBLite consensus disorder prediction 286 319 - -
Accr1g01206 319 Gene3D Transferase(Phosphotransferase) domain 1 78 286 - -
Accr1g01206 319 Pfam Protein kinase domain 6 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01206 319 MobiDBLite consensus disorder prediction 284 319 - -
Accr1g01206 319 FunFam PR5-like receptor kinase 78 289 - -
Accr1g01206 319 ProSiteProfiles Protein kinase domain profile. 3 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01206 Accr-Chr1 35274471 35275430 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01206 1 317 Receptor kinase-like Gene Family AT1G66910 57.009 7.31e-127 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Accr1g01206 Pkinase 7.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01206 - - pcin:129293521 567