Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01205 ATGAAAAACCATGGCTCTTTGGCACCAAAGAAATATAGTTATTCAGAAGTTAAAAGAATGACAAAATCATTTTCAAACAAATTGGGGGAGGGAGGGTATGGTGTTGTATACAAAGCAAGCCTACCTGATGGTCGTCTTGTGGCAGTTAAAGTGATAAGGGAATCTAAAGGAAGTGGAGAAGAATTTCTAAATGAAGTTGCAAGTATCAGCAGAACCTCCCATGTCAATATAGTCACTCTCCTAGGATTTTGCTTCGAGAGGAACAAAGGAGTACTAATCTATGAATACATGTCAAATGGTTCCTTGGATAATTTCATTTATAAAAGAGGATCTCCAAATGCTTTTTGTACCTTGGAGTGGAAGGTGTTGTACCAAGTTGCTATCGGCATTGCTCGTGGGCTTGAGTACTTGCATCGGGGTTGTAACACGAGAATTTTGCACCTTGATATCAAACCTCAAAACATCCTCTTGGACGAAGATTTCTCCCCCAAAATATCTGATTTTGGATTAGCTAAAATATGTCAAAAGAGAGAGAGTATCGTGTCAATACTGGGCACAAGAGGAACAATAGGGTTCATTGCACCAGAACTATTCAACAGAGCATTTGGTGGTGTTTCTCACAAAGCTGATGTCTATAGCTATGGCATGTTAGTCCTTGAAATGGTTGGAGGAAGGAAGAATTATGACAGTGGAGGCTCACAAACCGAAGAACAGTATTTTCCAGATTGGATTCATAAGGATCTTGAACATGGTAAGCATCCAGCTAGTTCTGTAGTAATCACAGTGGAAGATGATGAAATGGTAAGGAAGATGACTTTAGTGAGTCTATGGTGTATTCAAACAAATCCATTTGATAGACCAGCTATGAGTAAAGTGGTAGAAATGTTAGAAGGACCTCTTCAATCGTTATCAGTTCCTCCAAAGCCATCCCTTCAATGTCCTACAAAATCACCAGTTACACAATTGTCAAGTGGATCTTCCCAAGAAGTGACTCGGACAAATTCAATATCCAATTAA 1017 0.3923 MKNHGSLAPKKYSYSEVKRMTKSFSNKLGEGGYGVVYKASLPDGRLVAVKVIRESKGSGEEFLNEVASISRTSHVNIVTLLGFCFERNKGVLIYEYMSNGSLDNFIYKRGSPNAFCTLEWKVLYQVAIGIARGLEYLHRGCNTRILHLDIKPQNILLDEDFSPKISDFGLAKICQKRESIVSILGTRGTIGFIAPELFNRAFGGVSHKADVYSYGMLVLEMVGGRKNYDSGGSQTEEQYFPDWIHKDLEHGKHPASSVVITVEDDEMVRKMTLVSLWCIQTNPFDRPAMSKVVEMLEGPLQSLSVPPKPSLQCPTKSPVTQLSSGSSQEVTRTNSISN 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01205 338 FunFam serine/threonine-protein kinase PBS1-like 1 96 - -
Accr1g01205 338 PIRSF ILK 6 305 - -
Accr1g01205 338 PANTHER RUST RESISTANCE KINASE LR10-RELATED 9 317 IPR045874 GO:0004672
Accr1g01205 338 SUPERFAMILY Protein kinase-like (PK-like) 8 296 IPR011009 -
Accr1g01205 338 FunFam PR5-like receptor kinase 97 308 - -
Accr1g01205 338 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Accr1g01205 338 ProSiteProfiles Protein kinase domain profile. 22 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01205 338 SMART serkin_6 22 296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01205 338 MobiDBLite consensus disorder prediction 305 338 - -
Accr1g01205 338 Pfam Protein kinase domain 25 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01205 338 Gene3D Phosphorylase Kinase; domain 1 2 96 - -
Accr1g01205 338 ProSitePatterns Protein kinases ATP-binding region signature. 28 50 IPR017441 GO:0005524
Accr1g01205 338 Gene3D Transferase(Phosphotransferase) domain 1 97 305 - -
Accr1g01205 338 MobiDBLite consensus disorder prediction 303 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01205 Accr-Chr1 35274414 35275430 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01205 2 336 Receptor kinase-like Gene Family AT1G66910 56.176 2.86e-131 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Accr1g01205 Pkinase 9.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01205 - - pcin:129293521 597.045