Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01174 ATGCAACTTCATTTCAGCGCCTCTGTTTTGTTTTTTATCATTTCGATCACCCTTTATCAAATTCCAATTTGCTTCTGTGATGATTATGAGGCATCCTGCAGCTCTTCGTTTGATTGTGGAAATATCAAGAACATTGGCTACCCTTTCTGGGGATCGGAAAGACCAGAGGATTGTGGCTACCCAGGATTTAAACTAGATTGCTATTATGATTATGCAGAAATCACCATCATCAATGACACCTATCGAGTCCTTCAAGTCAACTATTCTGATTATGGTCTTAGAGTTGTGAGAACTGACTTCTGGCATAATTCTTGTCCAACCTCTTTTACGAACAGTTCCATAGATGTCAATTTGTTCGAATATCGTCCGGACTCTCATAACCTGACACTGTACTACGATTGTTCTTCCCCTCCAGTTTCTCTCTCATATATCCGTTCCACTAAGTTTAATTGCACTGAATATGGTACCGAAGTGGACAGCTATTTCATTACCGAGGTCCCTGAAATTGATGCGACAGGGATCTGCGCATCTACTCTCATCGTTCCAATTTTGGAGTCACAAGTCAGATATCTACAGGAAAACTCAACTGTGGAAAATCTGAAGGCTGCTATTGATGAAGGTTTTGTTTTGGTATGGAAGGCAGATAATGCTCAGTGTAATGACTGTCGAAAGTCTGGTGGACAATGCGGTTATAACACAAGCTCAAGTGAATTCACTTGCTATTGTAGAGACGGACCTGTTCCATCGACATGTAGATCAAAGAAGTCTAAGATAGGCCTTATAGCAGGTGTTAGTGCAGCATCAGCAGCAATTTTTTTCTTTCTTATTGGATTATGGGTGTTCTTTACGGTAAGGCGAAGGAAAAGAGTTGCAGAACAGTCACAAACCAAGGACCTCTTTCTGGCTCCTTATAGCAGAGGCGTTACTTCCTCTACAACAACTTCATCTCAGAGTGTCCCATCTTACGTTACCTCAAAGCCTGAGTCTTTGCAACATAGTTTCTTCTATGGTGTCAAAGTGTTTACCTATGCTGAACTAGAGGAAGCCACTAAAAATTTTGATCCCTCCGTGGAACTTGGTGATGGAGGTTTCGGCACTGTTTATTATGGCATTCTGAAAGATGGACGTGCAGTTGCAGTGAAACGGCTTTACGAGAGCAATCTGAAACGTGTTGAGCAATTCAGGAATGAAGTTGAGATTCTAGCTAGACTAAAGCATAAAAACCTGGTTGAACTTTATGGATGCACATCTAGACATAGCCGAGAGCTTCTCCTTGTCTATGAATACATTGCTAATGGAACAGTGTCAGACCATCTCCATGGGGATCGATCTCAGTCTTCTCTGCTCCCTTGGCGTACCCGATTGAACATCGCGGTAGAGACAGCTGAGGCCCTAGCCTTCCTCCATGAATCCGATGTCATACACCGTGATGTTAAAACCAATAACATCCTCCTAGACCATAACTTTTGTGTCAAGGTTGCTGATTTTGGCCTTTCAAGGTTGTTCCCAAATGATGTTACCCATGTGTCGACTGCCCCACAAGGAACACCTGGTTATGTTGACCCTGAGTATTTTCAGTGCTACAAAGTCACCAATAAAAGTGATGTTTATAGCTTTGGAGTTGTCTTGATCGAGCTCATATCGTCCTTAGAAGCCGTGGACATCACCAGGCACCGTCATGATATAAACTTAGCCAACCTTGCTATCAACAGGATTCAGAACCATCAAGTGCATGAGTTGGTTGATCCACTTCTAGGGTTTGAGAGAGACGATGCAGTGAAGAAGATGACAACGGCGGTGGCAGAATTGGCCTTTAGGTGTTTGCAGCAAGACGGCGAGATGAGACCCTCCATGGATGAGGTGCTGCAGATCTTAAGAGGGATCCAGAGAGAAGGGTATGGTGGACATGAAGAAGTAGAGAAGAAGAATAACATGGTGGATGAAATCATGCTTTTGAAAGATGCTCCTCCCCTATGTTCACCAGATTCAGTTGCTGATAATAAGTGGGTTAGTTCCTCTACTACTTCTACTTCCTCATAA 2040 0.4299 MQLHFSASVLFFIISITLYQIPICFCDDYEASCSSSFDCGNIKNIGYPFWGSERPEDCGYPGFKLDCYYDYAEITIINDTYRVLQVNYSDYGLRVVRTDFWHNSCPTSFTNSSIDVNLFEYRPDSHNLTLYYDCSSPPVSLSYIRSTKFNCTEYGTEVDSYFITEVPEIDATGICASTLIVPILESQVRYLQENSTVENLKAAIDEGFVLVWKADNAQCNDCRKSGGQCGYNTSSSEFTCYCRDGPVPSTCRSKKSKIGLIAGVSAASAAIFFFLIGLWVFFTVRRRKRVAEQSQTKDLFLAPYSRGVTSSTTTSSQSVPSYVTSKPESLQHSFFYGVKVFTYAELEEATKNFDPSVELGDGGFGTVYYGILKDGRAVAVKRLYESNLKRVEQFRNEVEILARLKHKNLVELYGCTSRHSRELLLVYEYIANGTVSDHLHGDRSQSSLLPWRTRLNIAVETAEALAFLHESDVIHRDVKTNNILLDHNFCVKVADFGLSRLFPNDVTHVSTAPQGTPGYVDPEYFQCYKVTNKSDVYSFGVVLIELISSLEAVDITRHRHDINLANLAINRIQNHQVHELVDPLLGFERDDAVKKMTTAVAELAFRCLQQDGEMRPSMDEVLQILRGIQREGYGGHEEVEKKNNMVDEIMLLKDAPPLCSPDSVADNKWVSSSTTSTSS 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01174 679 ProSitePatterns Protein kinases ATP-binding region signature. 359 381 IPR017441 GO:0005524
Accr1g01174 679 Pfam Protein tyrosine and serine/threonine kinase 358 624 IPR001245 GO:0004672|GO:0006468
Accr1g01174 679 CDD STKc_IRAK 359 628 - -
Accr1g01174 679 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 9 673 IPR044652 GO:0004672
Accr1g01174 679 ProSiteProfiles Protein kinase domain profile. 353 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01174 679 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 328 429 - -
Accr1g01174 679 Pfam Wall-associated receptor kinase galacturonan-binding 33 97 IPR025287 GO:0030247
Accr1g01174 679 SMART serkin_6 353 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01174 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
Accr1g01174 679 MobiDBLite consensus disorder prediction 665 679 - -
Accr1g01174 679 Gene3D Transferase(Phosphotransferase) domain 1 430 639 - -
Accr1g01174 679 MobiDBLite consensus disorder prediction 660 679 - -
Accr1g01174 679 Pfam Wall-associated receptor kinase C-terminal 168 245 IPR032872 -
Accr1g01174 679 FunFam Wall-associated receptor kinase-like 20 430 638 - -
Accr1g01174 679 SUPERFAMILY Protein kinase-like (PK-like) 327 628 IPR011009 -
Accr1g01174 679 Gene3D Phosphorylase Kinase; domain 1 324 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01174 Accr-Chr1 34310101 34317352 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01174 37 679 Receptor kinase-like Gene Family AT1G25390 43.617 8.48e-148 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Accr1g01174 PK_Tyr_Ser-Thr 4.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01174 - - gmx:100811407 768.459