Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01173 ATGGCTTCTCTCTTCACCTTCGCTTTTCTTCTTTCCAGCATAGCACTATCGGTACTGCTCCAGATTCCTTTTTACTCAAGAGCCTACGATTATTATGAAGCTTGCAGTAATCTGTATGACTGCGGGACGATAAGGAACGTTGGGTTTCCATTCTGGGGAAAAGGTCGGCCACAACGTTGTGGGTACCCTGAGTTGTTCCTCAATTGTTCGGGAAATTCGACATTCATAACGATTCAAGGCGTTAGATACTTGGTTTTGGATGCCAAACCGGACAAGCAAGTTATGAAAATTGTTAGGTTTGACTATATGGACGATCTTTGCCCTGATCAGTTTATCAACCCGATCCTTGACCCTCAGGTGTTTGAATATGAGCCTGAACTAAATTATCTTACACTTGCATATGGTTGTTCGTCAGGAATTCCTTTTGTGAAGGTTGGGCAATTCTTTTGCTCCAAAGATGGGCTTGATGATGAAAGTGGCTTTGCTCTGTTGGATAAGAATCCTGTATTATCTAAGTTATGCAATGCAAGCATAGTTGTTCCTATTGAAGTTCCTCTGTCACCGGTTGATATTGTGGATTTGGGCAAAATCCAAGGGGCAATCAGAAATGGATTTGAAGTGAAATGGATAACTGGTACTGATGAGTGTGACAAGTGTCGGAAATCAGGGGGAGTCTGTGGCTATGATTGGGCTGCAAGAAACAATTCCTGCTACTACAAACATGAATCTTCAGCCTCCTCCTCCGTAACAGGATATTACTCGGAACCTCATCCGCTTTCAGAGAAGTCTAAGATAGGCCTTATAGCAGGTGTTAGTGCAGCATCAGCAGCAATTTTTTTCTTTCTTATTGGATTATGGGTGTTCTTTACGGTAAGGCGAAGGAAAAGAGTTGCAGAACAGTCACAAACCAAGGACCTCTTTCTGGCTCCTTATAGCAGAGGCGTTACTTCCTCTACAACAACTTCATCTCAGAGTGTCCCATCTTACGTTACCTCAAAGCCTGAGTCTTTGCAACATAGTTTCTTCTATGGTGTCAAAGTGTTTACCTATGCTGAACTAGAGGAAGCCACTAAAAATTTTGATCCCTCCGTGGAACTTGGTGATGGAGGTTTCGGCACTGTTTATTATGGCATTCTGAAAGATGGACGTGCAGTTGCAGTGAAACGGCTTTACGAGAGCAATCTGAAACGTGTTGAGCAATTCAGGAATGAAGTTGAGATTCTAGCTAGACTAAAGCATAAAAACCTGGTTGAACTTTATGGATGCACATCTAGACATAGCCGAGAGCTTCTCCTTGTCTATGAATACATTGCTAATGGAACAGTGTCAGACCATCTCCATGGGGATCGATCTCAGTCTTCTCTGCTCCCTTGGCGTACCCGATTGAACATCGCGGTAGAGACAGCTGAGGCCCTAGCCTTCCTCCATGAATCCGATGTCATACACCGTGATGTTAAAACCAATAACATCCTCCTAGACCATAACTTTTGTGTCAAGGTTGCTGATTTTGGCCTTTCAAGGTTGTTCCCAAATGATGTTACCCATGTGTCGACTGCCCCACAAGGAACACCTGGTTATGTTGACCCTGAGTATTTTCAGTGCTACAAAGTCACCAATAAAAGTGATGTTTATAGCTTTGGAGTTGTCTTGATCGAGCTCATATCGTCCTTAGAAGCCGTGGACATCACCAGGCACCGTCATGATATAAACTTAGCCAACCTTGCTATCAACAGGATTCAGAACCATCAAGTGCATGAGTTGGTTGATCCACTTCTAGGGTTTGAGAGAGACGATGCAGTGAAGAAGATGACAACGGCGGTGGCAGAATTGGCCTTTAGGTGTTTGCAGCAAGACGGCGAGATGAGACCCTCCATGGATGAGGTGCTGCAGATCTTAAGAGGGATCCAGAGAGAAGGGTATGGTGGACATGAAGAAGTAGAGAAGAAGAATAACATGGTGGATGAAATCATGCTTTTGAAAGATGCTCCTCCCCTATGTTCACCAGATTCAGTTGCTGATAATAAGTGGGTTAGTTCCTCTACTACTTCTACTTCCTCATAA 2061 0.4377 MASLFTFAFLLSSIALSVLLQIPFYSRAYDYYEACSNLYDCGTIRNVGFPFWGKGRPQRCGYPELFLNCSGNSTFITIQGVRYLVLDAKPDKQVMKIVRFDYMDDLCPDQFINPILDPQVFEYEPELNYLTLAYGCSSGIPFVKVGQFFCSKDGLDDESGFALLDKNPVLSKLCNASIVVPIEVPLSPVDIVDLGKIQGAIRNGFEVKWITGTDECDKCRKSGGVCGYDWAARNNSCYYKHESSASSSVTGYYSEPHPLSEKSKIGLIAGVSAASAAIFFFLIGLWVFFTVRRRKRVAEQSQTKDLFLAPYSRGVTSSTTTSSQSVPSYVTSKPESLQHSFFYGVKVFTYAELEEATKNFDPSVELGDGGFGTVYYGILKDGRAVAVKRLYESNLKRVEQFRNEVEILARLKHKNLVELYGCTSRHSRELLLVYEYIANGTVSDHLHGDRSQSSLLPWRTRLNIAVETAEALAFLHESDVIHRDVKTNNILLDHNFCVKVADFGLSRLFPNDVTHVSTAPQGTPGYVDPEYFQCYKVTNKSDVYSFGVVLIELISSLEAVDITRHRHDINLANLAINRIQNHQVHELVDPLLGFERDDAVKKMTTAVAELAFRCLQQDGEMRPSMDEVLQILRGIQREGYGGHEEVEKKNNMVDEIMLLKDAPPLCSPDSVADNKWVSSSTTSTSS 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01173 686 CDD STKc_IRAK 366 635 - -
Accr1g01173 686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 480 492 IPR008271 GO:0004672|GO:0006468
Accr1g01173 686 Gene3D Transferase(Phosphotransferase) domain 1 437 646 - -
Accr1g01173 686 FunFam Wall-associated receptor kinase-like 20 437 645 - -
Accr1g01173 686 Pfam Wall-associated receptor kinase galacturonan-binding 35 98 IPR025287 GO:0030247
Accr1g01173 686 SMART serkin_6 360 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01173 686 MobiDBLite consensus disorder prediction 667 686 - -
Accr1g01173 686 ProSiteProfiles Protein kinase domain profile. 360 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01173 686 Gene3D Phosphorylase Kinase; domain 1 331 436 - -
Accr1g01173 686 Pfam Protein tyrosine and serine/threonine kinase 365 631 IPR001245 GO:0004672|GO:0006468
Accr1g01173 686 ProSitePatterns Protein kinases ATP-binding region signature. 366 388 IPR017441 GO:0005524
Accr1g01173 686 SUPERFAMILY Protein kinase-like (PK-like) 334 635 IPR011009 -
Accr1g01173 686 Pfam Wall-associated receptor kinase C-terminal 171 241 IPR032872 -
Accr1g01173 686 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 10 680 IPR044652 GO:0004672
Accr1g01173 686 MobiDBLite consensus disorder prediction 672 686 - -
Accr1g01173 686 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 335 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01173 Accr-Chr1 34310101 34332141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01173 39 686 Receptor kinase-like Gene Family AT1G25390 42.433 1.79e-147 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Accr1g01173 PK_Tyr_Ser-Thr 4.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01173 - - aip:107635700 671.389