Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01163 ATGGGTGGGAAATCACGGCAGAAAATGGCCATTGGAATCGACCTTGGAACTACATACTCGTGTGTTGCAGTGTGGCAGCATGATCGAGCAGAGATCATCGTGAATGATCAAGGAAATAGAACGACGCCGTCTTATGTTGCCTTCACTGATACTCAAAGAATGGTTGGTGATGCCGCCAAGAACATGGCTGCACATAACCCTACTAACACTGTTTTTGGTAATTCTCCTCTCCTTTTTTCTAAAGTTCGTTTTGGTTCTCTCTCATATAAGTTATTCGCTTCCAGTTCAAGTGACTTGGCTTTTGCCAATGTTTAG 315 0.4349 MGGKSRQKMAIGIDLGTTYSCVAVWQHDRAEIIVNDQGNRTTPSYVAFTDTQRMVGDAAKNMAAHNPTNTVFGNSPLLFSKVRFGSLSYKLFASSSSDLAFANV 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01163 104 PRINTS 70kDa heat shock protein signature 9 22 - -
Accr1g01163 104 PRINTS 70kDa heat shock protein signature 37 49 - -
Accr1g01163 104 PRINTS 70kDa heat shock protein signature 59 67 - -
Accr1g01163 104 FunFam heat shock 70 kDa protein-like 4 92 - -
Accr1g01163 104 PANTHER HEAT SHOCK PROTEIN 70KDA 10 78 IPR013126 GO:0005524|GO:0140662
Accr1g01163 104 Pfam Hsp70 protein 10 73 IPR013126 GO:0005524|GO:0140662
Accr1g01163 104 SUPERFAMILY Actin-like ATPase domain 8 78 IPR043129 -
Accr1g01163 104 Gene3D - 2 83 - -
Accr1g01163 104 ProSitePatterns Heat shock hsp70 proteins family signature 1. 13 20 IPR018181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01163 Accr-Chr1 34038486 34038800 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01163 1 78 Calmodulin-binding Proteins AT3G12580 73.077 4.09e-34 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01163 K03283 - osa:4332420 121.709