Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01153 ATGGTCTTCTCTTCCTTTCCACCCTATCATCTAGATCCACCACCCAACTGGCCTCACCAGCAACTTGATCATCAGCAGCCAGAGGGACTGATTCATGCCCAGGGTTCCCAGGTTCCGCCTCCGCCGCCGCCACTACCGGTTGCTGATGCCGGTGATGGCACCAAAGGCTCGACGAGGCCGGGATCCATGGCTGATCGAGCTCGGCTAGCGAAGATAGCACAGCCAGAAGGGGCACTGAAATGTCCACGGTGCGAATCAACCAACACCAAGTTCTGTTACTACAACAATTACAACCTCTCTCAGCCTCGCCACTTCTGCAAGACTTGCCGGCGATACTGGACCCAAGGTGGCGCGTTGAGGAACGTCCCAGTCGGAGGAGGTTGTAGAAGGAAGAACAAAAGAATCAAAGGAACTAACAGCAGAAAATCATCAAAATCTCCCAACAAAGCAGCATCAACATCAGGTCATCACTTATTACCATCTCCACCATTACTTTTCCCTCCTCCTCCTACTACATCTCATACTAGTTACAGTGACTACGACGTCGTTTTTGGGGCAACAAACATCAGAGATGCTGAATTTCAAATTGCTTGTAATAACAATATAATTGGCAATAATAACATCAATGGCTTTATTAGTACTACTGAGCAATGGAAGCTACCAAGTCTCCTGCAGCATCATCAACAGTTTCCTTCAACATTCTTGAGTAATTTGGAGGCTCCACCAGTAGGGTTATATCATCAGTTTGAAAGATCGGAAAATAATGCTGAGATCATCGAACCTTCAACGAAATTGTTATATTCTGGTGGTAGTGGAAATATTGGTAGTGATCATAATCATCATCATCTTCAGCTTACTACTACAGTCAAAATGGAGGAAAATATGGATCAAGTGTTGGGTTTATCCAAAAGTCTTACGGGTAACTCGGAAAATAATAATAATAATGAACAATTTTGGGAAGCAAATAATAATGGCAGTGCATGGAACATCAATAATGTTTCTATTAGTTTCGCTTCTTCTTCTTCTTCGGCCGCCACCCATCTCGTGTGA 1050 0.4457 MVFSSFPPYHLDPPPNWPHQQLDHQQPEGLIHAQGSQVPPPPPPLPVADAGDGTKGSTRPGSMADRARLAKIAQPEGALKCPRCESTNTKFCYYNNYNLSQPRHFCKTCRRYWTQGGALRNVPVGGGCRRKNKRIKGTNSRKSSKSPNKAASTSGHHLLPSPPLLFPPPPTTSHTSYSDYDVVFGATNIRDAEFQIACNNNIIGNNNINGFISTTEQWKLPSLLQHHQQFPSTFLSNLEAPPVGLYHQFERSENNAEIIEPSTKLLYSGGSGNIGSDHNHHHLQLTTTVKMEENMDQVLGLSKSLTGNSENNNNNEQFWEANNNGSAWNINNVSISFASSSSSAATHLV 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01153 349 ProSitePatterns Zinc finger Dof-type signature. 81 117 IPR003851 GO:0003677|GO:0006355
Accr1g01153 349 MobiDBLite consensus disorder prediction 1 63 - -
Accr1g01153 349 MobiDBLite consensus disorder prediction 124 171 - -
Accr1g01153 349 MobiDBLite consensus disorder prediction 141 155 - -
Accr1g01153 349 ProSiteProfiles Zinc finger Dof-type profile. 79 133 IPR003851 GO:0003677|GO:0006355
Accr1g01153 349 Pfam Dof domain, zinc finger 78 133 IPR003851 GO:0003677|GO:0006355
Accr1g01153 349 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 67 306 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01153 Accr-Chr1 33339866 33341240 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01153 59 136 C2C2-Dof Transcription Factor Family AT2G37590 82.051 5.51e-42 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Accr1g01153 zf-Dof 2.6e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01153 - - pcin:129293462 422.165