LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr1g01139	ATGTCTTTCCAGCATAAAAGCTTTTGGATGCCACGGAATGCAGGATGCCTAGCTGATGAAAATATGGGTTATGAGAATTCTTCCAGAATTGAACCAAAGCGTGGTCATCAATGGTTTGTGGAAACAGGTGAACCAGAAATTATCAGCAACAACAAGAAGCAAGCCATTGAAGCTGTTGATGGCAGGCCAGTTTCAGGGGTTTCACATTTGGATGTATCTCATTGGGACACCAACTCTGGGTTTCACTCAGTTACAGGTCAGTTTTCTGAACGTCTCTTTGGATCTGAGCCTGCAAGGACTTTCAATTTGGTTGATAAGAACATGCCTTCAATGGGAAGTGGAAATCTGAATATGGGAAGGAAGGATTTTGAGAACAATTATGGAAATGATCCAGCAGTGGGGCTGTCAATATCTCACGCTATTGAGGACCCTTCATCTTGTCTCAATTTTGGTGGCATCAGAAAAGTTAAAGTTAATCAAGTTAGAGATGCTAACAATTGCATGCCTGCATCCATGGGGCACTCCTATAGTAGGGCAGATAATAATGCAATTCCGATGGTTGCTGGCTACAGTAAGAATATTGTCTCCGTGGGTACTGCAATAACCAAGGCTGATGAGAATCTTGGTTCAATGGGTCATGCATTCAATAAAGGAGATGGAAGTTTTATGCTGATGGGCCACCCTTATGGCAAGGGAGATGAAAACGTCTTATCTATGGGTCAGCCCTTTGACAGGGGAGATTGCAATTTCATATCAATAGGTCAATCATATGAAAAGGATGATGACAACTTGATATCACTGGGCAACTCATACAACAAGGGGCACGACCCCCACTTGATGCCAATAGTTCCAGCCTATAGTAAATCAGGAGAAAATTTCATTTCAGTTGCTCCTTCCTATGACAAGGGAACTGATCATATCATGTCAGTGGGTCCTACGTATGGCAAGGTGGATTCTAACATCGTATCAACCAACCCTTCATATGATAAAGGAGATTCCAACTTGGGTCACAACTACAATAAGAATGAGGGCTGTACCATATCTTTTGGAGGCTTTAATGATGATCCTGAGCCAAATCCCTCGGGTGGGATCATTAGTGGCTATGATTTGTTGATCAGCGGCAACCAGAACTCAGCTCATGGTTTGGATGGCCAGAAGGACCTAGTTGAGTCAAACTCTGAACCAGTTGTAAATAGCAATCCAAAATCCAATTCTAAAACTGATAATGTTCCTAAAAGTAAGGAATCGAAGTCAAGGAAGGTTCCTTCTAATAACTTCCCTTCAAATGTCAAAAGTCTGTTATCAACTGGAATTTTTGATGGCGTTCCTGTAAAGTATGTTTCTTGGTCGCGGGAGAAACATCTTAAAGGAGTCATAAAAGGTACTGGGTATTTGTGCTCCTGCAATGAATGCAACGAGTCCAAGGCTCTTAACGCATACGAATTTGAGCGTCATGCGGGTGCCAAGACCAAACACCCAAACAACCACATTTACTTTGAGAATGGGAAAACCATCTATGCTGCTGTTCAAGAGCTGAAGAACACTCCTCAGGAGATGCTTTTTGATGCAATTCAAAATGTTACTGGATCTACTATCAACCAAAAGAATTTCCGAGTCTGGAAAGCATCATACCAAGCTGCTACTCGGGAACTTCAGCGTATATATGGGAAAGATGAAGTGATCATCCCAACTTAA	1695	0.4212	MSFQHKSFWMPRNAGCLADENMGYENSSRIEPKRGHQWFVETGEPEIISNNKKQAIEAVDGRPVSGVSHLDVSHWDTNSGFHSVTGQFSERLFGSEPARTFNLVDKNMPSMGSGNLNMGRKDFENNYGNDPAVGLSISHAIEDPSSCLNFGGIRKVKVNQVRDANNCMPASMGHSYSRADNNAIPMVAGYSKNIVSVGTAITKADENLGSMGHAFNKGDGSFMLMGHPYGKGDENVLSMGQPFDRGDCNFISIGQSYEKDDDNLISLGNSYNKGHDPHLMPIVPAYSKSGENFISVAPSYDKGTDHIMSVGPTYGKVDSNIVSTNPSYDKGDSNLGHNYNKNEGCTISFGGFNDDPEPNPSGGIISGYDLLISGNQNSAHGLDGQKDLVESNSEPVVNSNPKSNSKTDNVPKSKESKSRKVPSNNFPSNVKSLLSTGIFDGVPVKYVSWSREKHLKGVIKGTGYLCSCNECNESKALNAYEFERHAGAKTKHPNNHIYFENGKTIYAAVQELKNTPQEMLFDAIQNVTGSTINQKNFRVWKASYQAATRELQRIYGKDEVIIPT	564

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr1g01139	564	MobiDBLite	consensus disorder prediction	392	407	-	-
	Accr1g01139	564	MobiDBLite	consensus disorder prediction	392	426	-	-
	Accr1g01139	564	PANTHER	AUTOIMMUNE REGULATOR	8	512	-	-
	Accr1g01139	564	Pfam	Tify domain binding domain	457	511	IPR032308	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr1g01139	Accr-Chr1	32813587	32821945	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr1g01139	419	545	PHD Transcription Factor Family	AT3G53680	54.331	1.19e-40	155

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr1g01139	-		-	pcin:129292723	1001.89