Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01138 ATGAAGAGGGAAAGAGATCAAGTTCTTGACTGCATCTCCATGGCCAACTGTTTGATGTTGCTTTCTCGTGGCGGAGGCCAATTTAATCGGCCGGTGATCGCAGCCGTCACCCATGCCGATGTTGATAGCCATAATGATCGTGTGTTCGAGTGCAAGACTTGTAACCGGCAGTTCCCATCGTTTCAAGCATTGGGCGGTCATCGGGCGAGCCATAAGAAGCCGAGGCTGGCCACCGCCGCCGCCGGTGAGATGGACATGCTTAATCATCATGAAACGAAGCCTAAAACTCACCAGTGTTCCATTTGTGGGATGGAATTTGCAATAGGGCAAGCGTTGGGAGGTCATATGAGAAAGCACAGAGCAGCTGCAACTTTGAATAATAGTCGTAATACTGCCCGTCATCCCAACAAAACGACGACGTTGATGAGTAGCAATAGTGACGAAGGCAGTTGTCTTGATTCTGATCACCAGGTTAATAGTTCTTCTGGCGAAAATAGGAAGAAAGTTTTGGTTTTGGATCTGAATTTGACACCTTCCGAGAATGATTCGGAGTTTATTAATTTTATCTGA 570 0.4702 MKRERDQVLDCISMANCLMLLSRGGGQFNRPVIAAVTHADVDSHNDRVFECKTCNRQFPSFQALGGHRASHKKPRLATAAAGEMDMLNHHETKPKTHQCSICGMEFAIGQALGGHMRKHRAAATLNNSRNTARHPNKTTTLMSSNSDEGSCLDSDHQVNSSSGENRKKVLVLDLNLTPSENDSEFINFI 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01138 189 Pfam C2H2-type zinc finger 48 74 - -
Accr1g01138 189 Pfam C2H2-type zinc finger 97 121 - -
Accr1g01138 189 Gene3D Classic Zinc Finger 47 119 - -
Accr1g01138 189 SUPERFAMILY beta-beta-alpha zinc fingers 47 119 IPR036236 -
Accr1g01138 189 MobiDBLite consensus disorder prediction 125 164 - -
Accr1g01138 189 ProSitePatterns Zinc finger C2H2 type domain signature. 99 119 IPR013087 -
Accr1g01138 189 ProSitePatterns Zinc finger C2H2 type domain signature. 51 71 IPR013087 -
Accr1g01138 189 ProSiteProfiles Zinc finger C2H2 type domain profile. 49 76 IPR013087 -
Accr1g01138 189 ProSiteProfiles Zinc finger C2H2 type domain profile. 97 124 IPR013087 -
Accr1g01138 189 PANTHER ZINC FINGER PROTEIN ZAT5 8 182 - -
Accr1g01138 189 SMART c2h2final6 97 119 IPR013087 -
Accr1g01138 189 SMART c2h2final6 49 71 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01138 Accr-Chr1 32693363 32693932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01138 1 186 C2H2 Transcription Factor Family AT2G37430 40.741 1.81e-36 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr1g01138 zf-C2H2_6 4.6e-08 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01138 - - adu:107486331 197.593