Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01134 ATGATGATATCGAGGGGGCTGTTCGGATGGTCCCCACCCCATATACAGCCGCTCACGCCGGTGTCGGAGGTATCTGAGCCGCCAGAGTCGCCGTCGCCTTATTTAGACCCCGGAGCTGAGACCTCTGCGTCCCACCAGCTTGAAGTGGAGGAGGAGATGGAGGAGCCCGAGGAGATGGAGCCACCGCCAGCCGCAGTGCCCTTCTCCAGGCTCTTTGCTTGCGCGGACCGGCTTGATTGGACTCTGATGGTCGTTGGCTCCCTGGCAGCAGCTGCTCATGGTACAGCTCTCGTAGTCTACTTACACTACTTTGCGAAGATCATTAATGTCTTGAGGATGGATCCTTCTCGGTCCGAGGAGCAATTCAGCAAGTTCAAGGAGCTTGCTTTAACCATAGTTTATATCGCTGCGGGTGTTTTTGCTGCTGGTTGGATAGAGGTTTCATGCTGGATTTTGACTGGAGAACGGCAGACTGCTGTTATCAGATCAAAATATGTTCAAGTATTGCTTAACCAAGATATGAGTTTTTTTGATACATATGGGAATAATGGAGATATTGTGAGCCAAGTATTAAGTGATGTGCTGCTCATTCAGTCTGCACTTAGTGAAAAAGTCGGAAATTATATCCACAATATGGCTACGTTCTTCAGTGGACTTGTTATTGGATTTATCAACTGTTGGCAGATTGCATTGATAACATTAGCCACAGGTCCATTTATTGTTGCTGCTGGAGGAATATCAAATATATTCCTACATAGGCTGGCAGAGAATATTCAAGACGCATATGCTGAAGCTGCTAGCATTGCAGAACAGGCGGTTTCTTATATCAGGACATTGTATGCATTTACAAATGAAACATTGGCCAAGTATTCGTATGCTACTTCACTTCAAGCTACTCTTAGATATGGTATCTTAATAAGTCTTGTTCAAGGGCTTGGTCTTGGATTTACGTATGGGCTTGCAATATGCTCGTGTGCATTGCAACTCTGGGTAGGAAGGTTCTTGGTTATGCATGAAAAAGCTCATGGTGGTGAAATCATAACAGCTCTCTTCGCTGTAATTTTAAGTGGCCTGGGTTTGAATCAGGCTGCAACAAACTTCTACTCATTTGATCAAGGACGCATAGCTGCTTATAGATTGTATGAGATGATAAGCAGGTCATCCTCATCTGTTAATCATGATGGAACTGCCCCAGATTCTGTGCAAGGGAATATAGAGTTTAGGAATGTTTATTTTAGCTATCTATCTCGTCCTGAAATCCCTATATTAAGTGGGTTTTATCTGACTGTTCCTGCTAAGAAAGCTGTGGCCCTTGTCGGCAGAAATGGATCTGGAAAAAGTAGTATAATTCCACTCATGGAGCGGTTCTATGATCCCACATTAGGGGAGGTTCTTTTAGATGGTGAGAACATTAAGAATCTGAAACTGGAATGGCTAAGGAGCCAAATAGGACTAGTCACCCAGGAGCCTGCTTTGCTTAGCTTGAGTATAAGAGATAACATTGCTTATGGTCGGGATGCCTCTATGGATCAAATTGAAGAGGCTGCCAAGATAGCCCATGCACATACATTCATCAGCTCATTAGGGAAAGGTTATGATACACAGGTTGGAAGGGCTGGCTTAGCCTTGACAGAAGAACAGAAGATAAAACTCTCTATTGCCAGAGCTGTGCTTTTAAATCCATCCATTCTTCTGCTTGATGAGGTAACTGGTGGACTTGACTTTGAGGCTGAAAGGGCTGTTCAGGAGGCTTTGGATCTTCTAATGTTGGGGCGTTCAACAATAATAATTGCTCGAAGGCTAAGTCTTATAAGGAATGCTGATTATATAGCTGTTATGGAGGAAGGTCAACTTGTTGAAATGGGTACCCATGATGAGTTATTGACCTTGGACGGCTTATATGCAGAGCTCCTTCGATGTGAAGAGGCAGCAAAACTTCCCAAGAGGATGCCTGTTCGAAACTACAAGGAGACTGCAGCTTTCCAAATCGAGAAGGATTCACCCTCAAGTCAAAGCTTTAAAGAACCATCATCCCCAAAAATGATGAAGTCACCTTCCCTTCAGAGAATTTCTAACGTATTTCGGCCTTCAGATGGCATCTATAGCTCACAGGAATCACCAAATGTTCGGAGCCCACCACCAGAAAAGATGCATCAAAATGGTCAGTCTATGGATGCAGCAGATAAGGAGCCTTCAATAAGAAGGCAGGATAGTTTTGAAATGAGGCTACCAGAGTTACCCAAAATTGATGTTCAGTCTGTGCATCGACAAAAATCTAATGGTTCTGACCCAGAATCCCCTGTCTCACCTCTGTTAACATCTGATCCCAAGAATGAACGCTCCCATTCACAGACTTTTAGTAGACCCCATAGTGATTCTGATGATGTTTCATTGAAACTGAGAGAAGCAAAAGATACCAAGCATCGAAAACCTCCATCATTTTGGAGACTTGCTAGACTTAGTTTTGCAGAGTGGCTTTATGCTGTGTTAGGAAGCATAGGTGCTGCCATCTTTGGTTCTTTCAATCCTCTTCTTGCTTATGTTATTGGCCTGGTGGTGACTGCTTACTATAGAATTGATAAAGATCATCATCGCCGGCAGGAGGTGGATAAGTGGTGCTTAATTATTGCTTGCATGGGCATTGTGACAGTTGTTGCCAACTTCTTACAACATTTCTACTTTGGTATTATGGGGGAGAAAATGACAGAAAGAGTTAGAAGAATGATGTTCTCAGCCATGCTACGCAATGAAGCTGGTTGGTTTGATGAAGAGGAAAACAGTGCTGACAATTTATCCATGCGTTTGGCCAATGATGCTACATTTGTACGAGCTGCTTTTAGCAATCGTCTTTCCATATTTATACAGGACAGTGCTGCAGTTATTGTTGCTGTTATTATTGGTGCATTCCTGCACTGGCGATTAGCACTCGTGGCATTAGCAACACTTCCTATCCTGTGTGTTTCTGCTATTGCCCAGAAATTGTGGCTTGCTGGATTTTCTAGGGGTATACAGGAAATGCACCGAAAGGCATCTTTGGTTCTCGAAGATGCAGTTAGAAATATTTACACTGTTGTAGCATTTTGTGCGGGCAATAAGGTAATGGAGCTCTATAGACTGCAGCTGAAGAAAATATTTAAGCAGAGCTTTTTGCATGGGGTGGCCATTGGTTTTGCATTTGGCTTTTCACAGTTTCTACTTTTTGCTTGTAATGCCCTTTTGCTTTGGTATACTGCCATATGCATAAAAAACAATTATATGGGTCCACCTACTGCACTCAAGGAGTATATGGTTTTCTCATTTGCAACATTTGCGCTGGTGGAGCCTTTTGGATTGGCTCCTTACATACTTAAACGGCGTAAATCCCTCATTTCAGTCTTTGAAATTATAGACCGTGTACCTAAAATTGACCCTGATGATAACACAGCATTGAAGCCACCCAATGTATATGGAAGCATTGAGTTGAAAAATGTTGATTTTTGTTATCCTTCTCGTCCTGAAGTTTTGGTATTGAGTAATTTCAGTCTCAAAATCAATGGGGGACAAACAGTTGCCATTGTTGGAGTTTCAGGGTCAGGAAAGAGCACTATAATATCCTTGATTGAGAGATTTTATGATCCAGTGGCTGGTCAAGTTTTGCTAGATGGGAGGGATTTAAAACTATATAATATGAGGTGGTTGAGGAGCCACCTTGGTTTAGTTCAGCAGGAACCTATTATTTTCTCAACTACCATAAGGGAAAATATCATATATGCGAGGCATAATGCCAGTGAAGCTGAGATGAAAGAGGCAGCGAGAATAGCAAATGCTCACCATTTCATAAGCAGCTTGCCGCATGGTTATGATACTCATGTTGGAATGAGAGGGGTTGACTTGACGCCTGGACAGAAACAGAGAATTGCGATAGCAAGAGTAGTGCTAAAGAATGCACCTATTTTGTTGTTGGATGAAGCTAGCTCATCAATCGAATCGGAGTCAAGCCGAGTGGTGCAAGAAGCTCTGGACACTCTTATAATGGGAAACAAGACCACCATCCTAATAGCACATAGGGCTGCAATGATGAGGCACGTTGATAACATTGTAGTGCTCAATGGAGGACGAATAGTAGAGGAAGGAACCCATGATTCATTGGTGGCAAAAAATGGCCTGTATGTCCGATTGATGCAGCCTCACTTTGGAAAGGCATTGCGTCAACATCGACTTATTTAG 4206 0.4303 MMISRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDPGAETSASHQLEVEEEMEEPEEMEPPPAAVPFSRLFACADRLDWTLMVVGSLAAAAHGTALVVYLHYFAKIINVLRMDPSRSEEQFSKFKELALTIVYIAAGVFAAGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVIGFINCWQIALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRFLVMHEKAHGGEIITALFAVILSGLGLNQAATNFYSFDQGRIAAYRLYEMISRSSSSVNHDGTAPDSVQGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDASMDQIEEAAKIAHAHTFISSLGKGYDTQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERAVQEALDLLMLGRSTIIIARRLSLIRNADYIAVMEEGQLVEMGTHDELLTLDGLYAELLRCEEAAKLPKRMPVRNYKETAAFQIEKDSPSSQSFKEPSSPKMMKSPSLQRISNVFRPSDGIYSSQESPNVRSPPPEKMHQNGQSMDAADKEPSIRRQDSFEMRLPELPKIDVQSVHRQKSNGSDPESPVSPLLTSDPKNERSHSQTFSRPHSDSDDVSLKLREAKDTKHRKPPSFWRLARLSFAEWLYAVLGSIGAAIFGSFNPLLAYVIGLVVTAYYRIDKDHHRRQEVDKWCLIIACMGIVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEAGWFDEEENSADNLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAVIIGAFLHWRLALVALATLPILCVSAIAQKLWLAGFSRGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLKKIFKQSFLHGVAIGFAFGFSQFLLFACNALLLWYTAICIKNNYMGPPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIDPDDNTALKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKINGGQTVAIVGVSGSGKSTIISLIERFYDPVAGQVLLDGRDLKLYNMRWLRSHLGLVQQEPIIFSTTIRENIIYARHNASEAEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGTHDSLVAKNGLYVRLMQPHFGKALRQHRLI 1401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01134 1401 CDD ABC_6TM_Pgp_ABCB1_D1_like 83 380 - -
Accr1g01134 1401 MobiDBLite consensus disorder prediction 743 797 - -
Accr1g01134 1401 FunFam ABC transporter B family member 20 1142 1391 - -
Accr1g01134 1401 MobiDBLite consensus disorder prediction 660 731 - -
Accr1g01134 1401 SUPERFAMILY ABC transporter transmembrane region 69 380 IPR036640 GO:0005524|GO:0016020
Accr1g01134 1401 Pfam ABC transporter transmembrane region 834 1096 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr1g01134 1401 Pfam ABC transporter transmembrane region 85 355 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr1g01134 1401 Pfam ABC transporter 1170 1318 IPR003439 GO:0005524
Accr1g01134 1401 Gene3D ABC transporter type 1, transmembrane domain 70 657 IPR036640 GO:0005524|GO:0016020
Accr1g01134 1401 FunFam ABC transporter B family member 6 999 1149 - -
Accr1g01134 1401 CDD ABC_6TM_Pgp_ABCB1_D2_like 818 1135 - -
Accr1g01134 1401 Gene3D - 395 642 IPR027417 -
Accr1g01134 1401 Gene3D - 1150 1389 IPR027417 -
Accr1g01134 1401 FunFam ABC transporter B family member 20 395 642 - -
Accr1g01134 1401 SMART AAA_5 1179 1366 IPR003593 GO:0016887
Accr1g01134 1401 SMART AAA_5 432 812 IPR003593 GO:0016887
Accr1g01134 1401 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 395 639 IPR027417 -
Accr1g01134 1401 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1152 1389 IPR003439 GO:0005524
Accr1g01134 1401 MobiDBLite consensus disorder prediction 18 62 - -
Accr1g01134 1401 MobiDBLite consensus disorder prediction 781 797 - -
Accr1g01134 1401 SUPERFAMILY ABC transporter transmembrane region 812 1137 IPR036640 GO:0005524|GO:0016020
Accr1g01134 1401 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 84 372 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr1g01134 1401 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1141 1388 IPR027417 -
Accr1g01134 1401 Coils Coil 251 271 - -
Accr1g01134 1401 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 829 1121 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr1g01134 1401 Gene3D ABC transporter type 1, transmembrane domain 769 1001 IPR036640 GO:0005524|GO:0016020
Accr1g01134 1401 Gene3D ABC transporter type 1, transmembrane domain 1006 1149 IPR036640 GO:0005524|GO:0016020
Accr1g01134 1401 FunFam ABC transporter B family member 20 70 407 - -
Accr1g01134 1401 PANTHER ABC TRANSPORTER B FAMILY 48 642 IPR039421 -
Accr1g01134 1401 MobiDBLite consensus disorder prediction 753 780 - -
Accr1g01134 1401 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 405 640 IPR003439 GO:0005524
Accr1g01134 1401 MobiDBLite consensus disorder prediction 663 718 - -
Accr1g01134 1401 Pfam ABC transporter 426 570 IPR003439 GO:0005524
Accr1g01134 1401 FunFam ABC transporter B family member 6 769 997 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01134 Accr-Chr1 32561047 32572529 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01134 53 711 Calmodulin-binding Proteins AT2G36910 44.279 4.94e-172 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01134 K05658 - qsa:O6P43_005710 2491.84