Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01121 ATGGTGGGTAAGGACGATTCTCGAAAAATGTTCTGGCGGTCGGCTTCTTGGTCGGCGTCTCGCTCCGCCGGGCACAATCCGGATGGCGAGGAAAAGGACTTCGTAGATCTGGATGGGAGTGTTGGTAATTTCAACGGGGAAAGTCGTAGGTACCCTCCCGCTCCATTAACCCCTCGATCGCAGCAAAATTGCAAGGCTCGGTCGTTTTTGCCGCCGTTACAGCCTCTTTCAATTGCCCGGAGGAGCTTGGACGAGTGGCCAAAGGCGAGTTCCGATGATATCGGTGAGTGGACTCATCCCCCAACTCCTAGTGGAAGAGGTAATGGAGAGAGGTTGAAGCTTGATTTATCTTCGATTCAGCGAAACCCTGATAAGAATGCTGGGCTTGTGAAGAGAGATAAGATTGCATGCTTTGATAAAGAATGCTCAAAAGTGGCCGAACATATTTATCTTGGAGGAGACGCTGTTGCTAGGGATAGGGATATATTGAAGCAAAATGGGATTACTCATATTTTGAACTGTGTGGGCTTTGTTTGTCCTGAGTACTTTAAATCTGATTTTGTATATAGAACGTTGTGGTTGCAGGATAGTCCTTCGGAAGATATTACTAGTATTCTGTATGATGTTTTTGACTACTTTGAAGATGTAAGGGAACAAAATGGAAGGGTATTTGTGCATTGTTGCCAGGGGGTATCTCGGTCCACCTCTCTGGTGATTGCATACCTTATGTGGAGGGAAGGGCAGAGTTTTGATGATGCTTTTCAGTATGTGAAGGCTGCAAGAGGTATTGCTGATCCTAATATGGGTTTTGCCTGCCAGTTACTGCAATGTCAAAAAAGGGTTCATGCAGTCCCACTTAGCCCAAGCTCTTTGCTGAGAATGTATAGAATAGCCCCACACTCACCTTATGATCCACTGCATCTTGTCCCCAAAATGTTGACGAATCCTTCTCCATGTGCACTGGATTCTAGAGGTGCGTTTATCATACATATACCTTATGCCATATATGTTTGGATCGGTAACAATTGTGAGGCCATTATGGAGAGGGATGCAAGAGGGGCTGTGTGTCAGATTGTTCGCTATGAGAAAGTGCAAGGTTCAATTTCGTTAATCAAGGAAGGTGAAGAACCGGATTACTTTTGGGATGCCTTTTCTAAGTTTTTGCCTTTGATGGAAAAATCTGATAATATTATAGAAAATGGAAAATCAGCCATAAATATTTCTCCAGGTGAGAGGAGAGTGGACTCATATAATGTTGATTTTGAAGTTTTCCAGAAAGCTATCATGGGAGGTTTTGTGCCTCCGTTTGCTTCAGCAGAGGATGAACTTGAAACCCGCCTTCCTGCTAGGGAGAGTTGTTGGAGTGTGTTAAGGCGTAAGTTTGCCTCTGCCAATATGAAGGAATTTGTCTCAGAGCCTAAATTATCATATTCAAAGGTCTATTTGGATTCAGTGTCAGGCACTCATTCATTGATAAATTCATCTCCATCGTCATCACTGTCATCAACTACGTCGTCTTCTTCATCCCCTTATCTCTCACCAGATTCCATTTCTTCTGATTCAAGCAATAGTTCAAAGAATTCAGAAACATCACTTGATTCTCCTTATGCGGCTTTGACTTCTACCCCAGCATCCTCATCTTTATCTAACTTTTCTAACTTGTCCCTCGTTTCATCTAGTTGTTCTTCTCAACCAGTAACAGAAGGTGCAGAAACTTGTAGTGTCAAGTTGGCATCACAGCCCTGTCATCAGTCGGCCTCCCTGCTATTGAAAAAACCTTCAACTTCTCTTGCTGAGCGCAGAGGCAGCCTGTCAAAGTCTTTGAAGTTACCACTGATAAGTGATAAAACACGGGTGATGAATAGATCATCAACTTTTAATGCTACTCGAGAAGATCGTGCTCTCATGAATGGCACCACTAGCTATTTGCATCAATCAGATAATATAGAAGATTCATCTGATTTAAATAACCATGTCAAGGGTAAAGGTTTGGATTCAACTCAACAGTGCAAGGTGTTTTTATGTTCAGGTGCTGCAGATAGTATTGACTACAGCAATGCTTCGTTTATTGGAAACTGTAGTGACCCTTGGGTGAGGATCTCTTCAGGAGAAGGCATAAAGTCTACTTCATCAAATGGAATAGATGGAAGTGGTCTCCTCCAATCTAATAATAAACAAAATTTAGTTTGTCATTGGCCCAGCTTAGAGAAGATTGTGACATTTGGTGCAAGTCATTTGGATTCTAAAGCAGCTTTTGTCATTTTCTCTTCAAGTCTAAGTTCTGGTAAGAACGCAAGAAATGTTTTGTATCTTTGGCTGGGAAGTTCTTTCAGCTTTGCTACATCTCAGGCTCGGTTAGATAGTAACAGAGTGATAGATTGTCGAGGAGAAGTTGACTGGAACCAAGTTGGTTGTGATGTCCTTGCCCATTTTGGTTTGCCAAATGACACTATCATTAAGATTGTTAAAGAGAATGAAGAACCAGAAGAGTTTCTTGCCTTACTCAGTAAATTGTAG 2517 0.4235 MVGKDDSRKMFWRSASWSASRSAGHNPDGEEKDFVDLDGSVGNFNGESRRYPPAPLTPRSQQNCKARSFLPPLQPLSIARRSLDEWPKASSDDIGEWTHPPTPSGRGNGERLKLDLSSIQRNPDKNAGLVKRDKIACFDKECSKVAEHIYLGGDAVARDRDILKQNGITHILNCVGFVCPEYFKSDFVYRTLWLQDSPSEDITSILYDVFDYFEDVREQNGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARGIADPNMGFACQLLQCQKRVHAVPLSPSSLLRMYRIAPHSPYDPLHLVPKMLTNPSPCALDSRGAFIIHIPYAIYVWIGNNCEAIMERDARGAVCQIVRYEKVQGSISLIKEGEEPDYFWDAFSKFLPLMEKSDNIIENGKSAINISPGERRVDSYNVDFEVFQKAIMGGFVPPFASAEDELETRLPARESCWSVLRRKFASANMKEFVSEPKLSYSKVYLDSVSGTHSLINSSPSSSLSSTTSSSSSPYLSPDSISSDSSNSSKNSETSLDSPYAALTSTPASSSLSNFSNLSLVSSSCSSQPVTEGAETCSVKLASQPCHQSASLLLKKPSTSLAERRGSLSKSLKLPLISDKTRVMNRSSTFNATREDRALMNGTTSYLHQSDNIEDSSDLNNHVKGKGLDSTQQCKVFLCSGAADSIDYSNASFIGNCSDPWVRISSGEGIKSTSSNGIDGSGLLQSNNKQNLVCHWPSLEKIVTFGASHLDSKAAFVIFSSSLSSGKNARNVLYLWLGSSFSFATSQARLDSNRVIDCRGEVDWNQVGCDVLAHFGLPNDTIIKIVKENEEPEEFLALLSKL 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01121 838 PANTHER MKPA PROTEIN 7 835 - -
Accr1g01121 838 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 200 261 IPR000387 GO:0016311|GO:0016791
Accr1g01121 838 ProSitePatterns Tyrosine specific protein phosphatases active site. 225 235 IPR016130 GO:0016311|GO:0016791
Accr1g01121 838 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 134 282 IPR029021 -
Accr1g01121 838 SMART dsp_5 141 280 IPR020422 GO:0006470|GO:0008138
Accr1g01121 838 Gene3D Protein tyrosine phosphatase superfamily 122 283 IPR029021 -
Accr1g01121 838 MobiDBLite consensus disorder prediction 492 534 - -
Accr1g01121 838 SUPERFAMILY Actin depolymerizing proteins 288 392 - -
Accr1g01121 838 ProSiteProfiles Dual specificity protein phosphatase domain profile. 141 283 IPR020422 GO:0006470|GO:0008138
Accr1g01121 838 MobiDBLite consensus disorder prediction 88 110 - -
Accr1g01121 838 Pfam Dual specificity phosphatase, catalytic domain 149 279 IPR000340 GO:0008138|GO:0016311
Accr1g01121 838 Gene3D Severin 292 388 IPR029006 -
Accr1g01121 838 SUPERFAMILY Actin depolymerizing proteins 735 836 - -
Accr1g01121 838 MobiDBLite consensus disorder prediction 1 62 - -
Accr1g01121 838 CDD DSP 142 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01121 Accr-Chr1 32186166 32190773 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01121 1 177 Protein tyrosine phosphatase (PTP) family AT3G55270 65.957 1.93e-71 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01121 - - qsa:O6P43_005717 1023.85