Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01101 ATGTCTTCTCGCATAGTTGCAGAGCCTGATAGCTCAGATACGGCGACGTATCTTAGTTCCATGGAGCTCCATAGTTTCCCGAGTCTTCCCAATGATCATCATTCATCCCCCACGTTGGGTCAGCTTCTCAAGCATGTCGGAGATGTACGCAAGGAAGCCACTGGAGACGGCAGCGAGACGCCGCTGCATCATGCCCTTGACATTGGAGATGGCCATGCCGGACTTGGGCCTCGTTCTCTGCCTTTTGTGTTGTCATTTAGTAATCTAACTTACAACGTCAAGGTCCGCCGGAAAATGAGCTTGTCGGCGTTGTTGTGTTCGTGCGGGAGAAACCGTCTTGGCGCCGCTGCCGTTGATGATACCATGGGTGAAGAGCGCCTCTTCTCTAGAACAAAGACCCTTCTGGATGACATCTCAGGCGAGGCTCGAGACGGCGAGATCATGGCCGTGATGGGTGCTAGTGGTTCCGGCAAGTCCACTCTTATCGACGCCTTGGCCAACCGTATAGCAAAGGGAAGTTTAAAAGGAACGGTGGCTCTTAACGGCGAGGCCATGAACTCCCGGCTTCTCAAGGCGATTTCAGCTTACGTAATGCAAGACGATCTTCTCTTCCCGATGCTCACCGTCGAAGAAACTCTCATGTTTGCGGCGGAATTCCGACTGCCGCGAACGCTTTCCAAATCCAAGAAGAAGATGCGAGTCCAAGCTCTAATTGACCAGCTCGGCCTCCACAACGCCGTCAATACTGTCATCGGAGACGAGAGCCACCGCGGCGTCTCAGGAGGCGAACGCCGGCGTGTGTCCATCGGCATTGACATAATCCACGACCCAATCATTCTCTTCCTCGACGAGCCGACCTCTGGGCTGGACTCCACCAGCGCGTTCATGGTGGTGAAGGTTCTTCAGAGAATCGCTCAAACAGGAAGCATAGTGATCATGTCCATTCACCAACCAAGTTACAGAATCCTCGGACTCCTCGACAGAATGATCTTCCTTTCGCGCGGGGAAACCGTCTACAGCGGCTCCCCGATGCAGCTCCCTTCATTCTTCGCCGAGTTTGGCCACCCGATACCAGAAAACGATAACCGGACTGAGTTCGCCCTTGATCTCATCCGCGAACTCGAGGGCTCACCAGGTGGCACCAAGAGCTTAGTTGAGTTCAACAAATCATGGCAGAACAAGAAGCATATTGAAAACACAACAAGCTCTAATAATAATCTGAGTCCTGTACAGAGTTTATCTCTCAAAGAAGCCATCAGTGCAAGCATTTCTAAAGGGAAATTAGTTTCAGGCGCGACCAACACAAATACAACAAGCAGCTCAATTGTCCCCACATATGCAAACCCATTTTGGATTGAACTTGCGACACTTTCGAAACGATCCTTCACCAATTCTCGCCGGATGCCGGAGCTGTTAGCAATGAGACTCGGCACCGTTATGGTCACCGGATTCCTCCTCGCCACCGTGTTCTGGCATTTAGATAATTCTCCGAAGGGAGTTCAAGAAAGACTCGGCTTCTTCGCATTCGCCATGTCCACCACCTTCTACACCACCGCAGACGCGCTTCCGGTGTTCCTCCAAGAGAGACACATCTTCATGAGAGAAACCTCCCACAACGCTTACCGGCGATCATCCTACCTCATTTCACACGCCCTCGTGGCCTTTCCTCCGTTGATCTTCCTGTCCTTAGCCTTCGCGGCCATCACCTTCTTTGCCGTCGGCCTCGACGGAGGATTCTCCGGTTTCGTCTTCTACTTCGCCATCATCCTCGCCTCCTTCTGGGCCGGAAACTCCTTTGTGACCTTCCTCTCCGGCCTCGTCCCCCACGTGATGCTCGGCTACACCATAGTCGTCGCCATTTTAGCCTACTTCTTGCTTTTCAGCGGTTTCTTTATAAACCGAGACCGTATTCCGGTGTACTGGATATGGTTCCATTACATGTCTCTGGTGAAATACCCATTCCAAGCTGTTCTCCAGAATGAATTCCATGACCCACTGAAGTGCTTCGTGAAGGGAGTTCAGATCTTCGATAACACGCCGCTAGGGTCGGTGCCGGAGACGATGAAGATGAAGCTATTGAAGAGTATGAGCGAGACGTTAGGTGTGAACATAACGAGCTCGACGTGCTTGACAACTGGTACAGACATATTGCAACAGAACGGCGTTTTGGATTTGAGCAAGTGGAATTGCTTGTGGGTCACTGTGGCTTGGGGCTTCTTCTTCAGGATATTGTTTTACTTCCTGTTGTTGTTAGGAAGCAAGAACAAGAGAAGATAA 2277 0.5147 MSSRIVAEPDSSDTATYLSSMELHSFPSLPNDHHSSPTLGQLLKHVGDVRKEATGDGSETPLHHALDIGDGHAGLGPRSLPFVLSFSNLTYNVKVRRKMSLSALLCSCGRNRLGAAAVDDTMGEERLFSRTKTLLDDISGEARDGEIMAVMGASGSGKSTLIDALANRIAKGSLKGTVALNGEAMNSRLLKAISAYVMQDDLLFPMLTVEETLMFAAEFRLPRTLSKSKKKMRVQALIDQLGLHNAVNTVIGDESHRGVSGGERRRVSIGIDIIHDPIILFLDEPTSGLDSTSAFMVVKVLQRIAQTGSIVIMSIHQPSYRILGLLDRMIFLSRGETVYSGSPMQLPSFFAEFGHPIPENDNRTEFALDLIRELEGSPGGTKSLVEFNKSWQNKKHIENTTSSNNNLSPVQSLSLKEAISASISKGKLVSGATNTNTTSSSIVPTYANPFWIELATLSKRSFTNSRRMPELLAMRLGTVMVTGFLLATVFWHLDNSPKGVQERLGFFAFAMSTTFYTTADALPVFLQERHIFMRETSHNAYRRSSYLISHALVAFPPLIFLSLAFAAITFFAVGLDGGFSGFVFYFAIILASFWAGNSFVTFLSGLVPHVMLGYTIVVAILAYFLLFSGFFINRDRIPVYWIWFHYMSLVKYPFQAVLQNEFHDPLKCFVKGVQIFDNTPLGSVPETMKMKLLKSMSETLGVNITSSTCLTTGTDILQQNGVLDLSKWNCLWVTVAWGFFFRILFYFLLLLGSKNKRR 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01101 758 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 55 744 - -
Accr1g01101 758 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 116 359 IPR003439 GO:0005524
Accr1g01101 758 Pfam ABC transporter 135 287 IPR003439 GO:0005524
Accr1g01101 758 SMART AAA_5 144 336 IPR003593 GO:0016887
Accr1g01101 758 FunFam ABC transporter G family member 6 124 350 - -
Accr1g01101 758 ProSitePatterns ABC transporters family signature. 259 273 IPR017871 GO:0005524|GO:0016887
Accr1g01101 758 Pfam ABC-2 type transporter 316 371 IPR043926 GO:0140359
Accr1g01101 758 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 131 350 IPR027417 -
Accr1g01101 758 Gene3D - 126 350 IPR027417 -
Accr1g01101 758 Pfam ABC-2 type transporter 454 662 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01101 Accr-Chr1 31281362 31283638 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01101 134 319 Calmodulin-binding Proteins AT2G36910 30.890 9.50e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01101 K05681 - qsa:O6P43_006042 1151.73