Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01090 ATGGGCCAGAAAGTGTCATTTTCAATTTTCCAAAACGACAAGGGAGACAAATTGAGCGAAATAACCGAGGAGACCAAAAAACCAGAGCAGGTCCGAAGAATTCAAAGGAAAGGTACGCTCTCTGACACTGGAAATGGCAGAATGATCACAGGTACGGACCCTCCTCCCGTCGCCCCCACCGTTTCGGTCTCCACAGATTCTGCCTCACCTCCCTCCTCTTCCAATGCCTCGGATTCTTCATCCCATTATGCCTCCGCTCCGCCTTCCGCTGATCAGGCCGCACAGCAATCGGCGGCGAAACCTGTGATTTTCTCGAAGGATTCCACTTCGCTCTTCAGCGGTGGTGGCCTCAGCTTTCTCTCTGGAAGTCGAAATGGAAAATTCAGCTATGGATATTCCAGCTTCAAGGGTAAAAGGACTTCAATGGAGGATTTTTACGAGACAAGGATATCAGAGGTTGATGGTCAGATGGTCGCCTTTTTTGCTGTTTTTGATGGTCATGGAGGTTCTCAGACCGCTGAATACCTGAAAAAGAACCTCTTTAAGAATATCAGCAGCCATCCTGACTTTATCAAAGACACAAAGACAGCTATTGTTGAAGCATTCAAACAGACAGATGTCGATTACCTGAAAGAGGAAAAGGGTTATCATAGAGATGCTGGGTCCACTGCATCAACAGCTGTATTGGTGGGGGATCGACTTGTGGTTGCCAATGTTGGTGATTCCAGAGTAGTTGCATCTAGAGCTGGTTCAGCTGTCCCTTTGTCAATTGATCACAAACCTGATAGATCTGATGAACGTAAGAGAATTGAACAGGCTGGGGGATTCGTTATTTGGGCAGGAACATGGCGGGTTGGTGGCGTTCTAGCTGTCTCCCGTGCATTTGGTGACAAACTTCTTAAGCCATATGTTGTTGCTGATCCAGAAATTCAGGAAGAAGAAATTGATGGTGTAGATTTTATAATAATAGCTAGTGACGGACTTTGGAATGTCATATCAAATAAGGAAGCAGTGTCTTTGGTGCAAAACATAACAGATGCAGAAGAAGCATCCAGAGAACTTATTAAAGAAGCCTACACACGTGGAAGCTCTGACAACATTACTTGTGTGGTTGTTCGATTTGATATATCTTGA 1134 0.4533 MGQKVSFSIFQNDKGDKLSEITEETKKPEQVRRIQRKGTLSDTGNGRMITGTDPPPVAPTVSVSTDSASPPSSSNASDSSSHYASAPPSADQAAQQSAAKPVIFSKDSTSLFSGGGLSFLSGSRNGKFSYGYSSFKGKRTSMEDFYETRISEVDGQMVAFFAVFDGHGGSQTAEYLKKNLFKNISSHPDFIKDTKTAIVEAFKQTDVDYLKEEKGYHRDAGSTASTAVLVGDRLVVANVGDSRVVASRAGSAVPLSIDHKPDRSDERKRIEQAGGFVIWAGTWRVGGVLAVSRAFGDKLLKPYVVADPEIQEEEIDGVDFIIIASDGLWNVISNKEAVSLVQNITDAEEASRELIKEAYTRGSSDNITCVVVRFDIS 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01090 377 Gene3D - 122 376 IPR036457 -
Accr1g01090 377 MobiDBLite consensus disorder prediction 1 15 - -
Accr1g01090 377 PANTHER PROTEIN PHOSPHATASE 85 374 IPR015655 GO:0004722|GO:0006470
Accr1g01090 377 ProSiteProfiles PPM-type phosphatase domain profile. 129 374 IPR001932 -
Accr1g01090 377 MobiDBLite consensus disorder prediction 16 36 - -
Accr1g01090 377 FunFam probable protein phosphatase 2C 59 121 376 - -
Accr1g01090 377 CDD PP2Cc 128 374 IPR001932 -
Accr1g01090 377 MobiDBLite consensus disorder prediction 57 99 - -
Accr1g01090 377 ProSitePatterns PPM-type phosphatase domain signature. 160 168 IPR000222 GO:0043169
Accr1g01090 377 SMART PP2C_4 118 372 IPR001932 -
Accr1g01090 377 Pfam Protein phosphatase 2C 130 367 IPR001932 -
Accr1g01090 377 MobiDBLite consensus disorder prediction 1 99 - -
Accr1g01090 377 SUPERFAMILY PP2C-like 122 375 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01090 Accr-Chr1 31063753 31072424 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01090 102 377 PP2C-type Phosphatase Gene Family AT1G43900 72.826 3.80e-153 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01090 K17506 - gmx:100776867 492.271