Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01066 ATGCTGTTGCGGCTTCGCACTCCAACCTTCCGGTGGTCTCTACGTTCTACTTCCAAGGCCCACCTGTATCCTCACCCTTCCTCCTCCTTCCACCTTAGCCTTTCTTCTTCAATCCAACCTCAGGTTTCTGACATATTGGACGGTGATTGCGATGGTTTCTTGCCATGGTTGGAGCGGAAAGCGGGCTCTAGGATTTCATCAGCTCTTTCAATTGGGAAGTCTCCGTATGGCAGGGCTCTTTTTGCCTCTAGGATTATACACATGGGAGAATGCATTTTACAGGTTCCTTATTCTGTGCAAATAAGTGTGGATAATTTACTCCCAGAAATCAGGTCTCTGATCAGCAATGGAGTTGGAAATATTTCAAAACTTGCTGTTGTTATTCTAGTTGAGCAGAAACTTGGTCGGGACTCTGAGTGGGACCCATATATCAGCTGTCTTCCTCAGCAAGGACAACTGCATAATACAATATTTTGGAGTGCAAGTGAATTGGATATGATCCGGATAAGCTCAGTGTATCAGGAAACTATCAATCAAAAGTCTCAAATTGAGAAGGACTTTTTGGCAATGAGACCAGTTTTTGAAAGCCTCCTCAAAAGTTTTGGAGAATTTACTTTCAGGGATTTCATGCATGCATGCACACTCGTTGGTTCTCGGGCATGGGGAAGCATGAAGGGCTTATCTCTGATTCCATTTGCAGATTTCTTGAATCATGATGGAGTTTCAGAAGCAATTGTAATGAGCGATGATGACAAACAATACTCAGAAGTTACCGCTGATCGTGATTATGCTCTTGGTGAACAGGTATTAATAAGATATGGAAAATTTTCTAATGCTACCTTGATGCTGGACTTTGGCTTTACACTTCCATACAACAATTACGATGAGGTCCATATCCAGCTTGATATACCTAAGCATGTTCATCTGCATGAGCCAAAGATGGAACTCTTGAGGCGATATTTTGTGCGCCCCACCAAAGACATGAAAGGATTGAGTAACTCTGTCAATTCTTTCATAATCAAGGAAGTGACATCAACCAGAGGAAAAGGAAAGGGGCTTCCGCAATCTCTTCGTGCATTTGCTCGCGTCCTGTCTTGCACCTCTCCTCAAGAACTGAAAGATTTGGCCATGGAGGCTGCACAAACTGATGGTAGGCTTGCTAGGCGCCCATTGCGCAATATCAACAAAGAGATTGAAGCACATTTGATGTTGTCTTCATTATTCGCCAAATTAATTTCTGAGCACTCTGAAGCCATTCTGTCATTGGAATCTTTCAACGCTCCCTCCCTTGGTACAAAACTTGCTGTTAGAAGAACAATGGCTCGGGGTCTGTTAGCTGGTGAGCTTCGCATTCTCAAATCTGCTTCTGCTTGGCTTGACAATTACTGTTCTTCTTTGACTGGACAATGTATTCATTGCTAG 1422 0.4332 MLLRLRTPTFRWSLRSTSKAHLYPHPSSSFHLSLSSSIQPQVSDILDGDCDGFLPWLERKAGSRISSALSIGKSPYGRALFASRIIHMGECILQVPYSVQISVDNLLPEIRSLISNGVGNISKLAVVILVEQKLGRDSEWDPYISCLPQQGQLHNTIFWSASELDMIRISSVYQETINQKSQIEKDFLAMRPVFESLLKSFGEFTFRDFMHACTLVGSRAWGSMKGLSLIPFADFLNHDGVSEAIVMSDDDKQYSEVTADRDYALGEQVLIRYGKFSNATLMLDFGFTLPYNNYDEVHIQLDIPKHVHLHEPKMELLRRYFVRPTKDMKGLSNSVNSFIIKEVTSTRGKGKGLPQSLRAFARVLSCTSPQELKDLAMEAAQTDGRLARRPLRNINKEIEAHLMLSSLFAKLISEHSEAILSLESFNAPSLGTKLAVRRTMARGLLAGELRILKSASAWLDNYCSSLTGQCIHC 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01066 473 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 285 464 IPR036464 -
Accr1g01066 473 Gene3D set domain protein methyltransferase, domain 1 47 287 - -
Accr1g01066 473 FunFam Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 46 287 - -
Accr1g01066 473 Pfam Rubisco LSMT substrate-binding 343 452 IPR015353 -
Accr1g01066 473 Pfam SET domain 77 274 IPR001214 GO:0005515
Accr1g01066 473 SUPERFAMILY SET domain 50 293 IPR046341 -
Accr1g01066 473 Gene3D - 290 465 IPR036464 -
Accr1g01066 473 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 50 412 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Accr1g01066 SET 5.2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01066 K19199 - gmx:100818002 603.979