Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01058 ATGAGGATTATGATAAAAGGTGGTGTTTGGAAAAACACCGAAGATGAAATACTCAAAGCTGCTGTCATGAAATATGGTAAAAACCAATGGGCTCGAATCTCTTCACTCTTGGTTCGCAAATCCGCCAAGCAATGTAAGGCTCGATGGTACGAGTGGCTTGATCCTTCCATTAAAAAGACTGAATGGACAAGAGAAGAGGATGAAAAGCTTCTTCATCTTGCTAAGCTTATGCCCACACAGTGGAGAACAATCGCTCCAATTGTTGGCCGTACGCCTTCCCAGTGCCTTGAGCGGTATGAGAAACTCCTTGATGCAGCCTGTGTCAAGGATGAGAACTATGAACCTGGTGATGACCCACGGAAATTGCGACCTGGTGAGATTGATCCAAACCCTGAATCAAAGCCTGCACGACCAGATCCTGTTGATATGGATGAGGATGAGAAGGAAATGTTGTCTGAAGCCCGAGCTAGGTTAGCCAACACCAAGGGTAAGAAGGCAAAACGGAAAGCTAGAGAGAAACAACTTGAAGAAGCCAGGAGGCTAGCCTCCTTACAAAAAAAGAGAGAATTGAAGGCTGCTGGAATTGATATCAGGCATCGGAGGAGGAAAAGGAAAGGAATAGACTACAATGCAGAAATCCCTTTTGAGAAAAGGCCTCCTCCAGGGTTTTTTGATGTTACTGATGAGGATAGATCAGTGGAACAGCCCAAATTCCCTACCACAATTGAAGAACTTGAGGGAAAAAGAAGGATTGATGTGGAAGCACAGTTAAGAAAGCAAGACATTGCAAAGAATAAGATTTCCCAAAGGCAAGATGCCCCCTCTGCTATACTTCATGCCAACAAGCTCAATGACCCAGAAGCTGTAAGAAAAAGGTCAAAACTGATGCTTCCACCACCACAAATTTCTGATAATGAATTAGAAGAAATTGCAAAGATGGGTTATGCCAGTGACCTTATGGGGAGTGAGGAAATTGCTGAAGGCAGTGGTGCAACACATGCTCTTTTGGCTAATTATGCTCAGACTCCTAGCCAGGGAGTGACTCCTTTGCGAACTCCTCAGAGAACACCGGCTGGTAAAGGAGATGCTATCTTGATGGAAGCTGAAAATCTGGCAAGGTTAAGGGAGTCTCGGACACCATTGTTGGGAGGAGATAACCCAGAGTTGCATCCTTCAGACTTTTCTGGGGTCACTCCTAGGAAAAAGGAAATTCAGACTCCAAATCCTATGTTGACTCCCTCTGCAACACCTGGAGGTGCAGGCCTCACTCCAAGAAGTGGTGGGACACCAGCAAGGGATGGCTTTTCTTTTGGCATGACTCCAAAGGGAACTCCACTAAGGGATGAGCTTCATATCAATGAAGACATGGATATGCCTGAGAGCACAAAACTTGAGCTACGTAGACAAGCTGATCTCAAAAGAAGCTTGCGCTCTGGTTTAAGCAGTCTTCCACAGCCAAAGAATGAGTACCAGATAGTTATGCAACCAGCTCCAGAAGATGTTGAAGAACCTGTGGAAAAGATTGAAGAGGATATGTCTGACAGAATTGCTCGAGAAAAAGCTGAAGAAGAAGCTCGGCAACAAGCATTGCTTAGAAAACGATCTAAGGTCCTTCAAAGGGAGCTTCCCAGGCCTCCTCCTGCATCACTGGAACTGATAAGAAATTCTTTAATTATTGCTGATGGGGATAAGAGTTCCTTTGTTCCTCCTACTTCTATGGAGCAAGCTGATGAGATGGTAAGAAAGGAGCTTCTAAGCTTACTGGAACATGACAATGCCAAGTACCCACTTGATGAGAAAGTGAATAAGGAGAGGAAAAAAGGAGTCAAGCGTGCTGCAAATGGGCCTGCTATTGTCCCTCTGATTGAAGATTTTGATGAAGATGAAATGAAAGATGCTGATCAGTTGATAAAGGAGGAGGCTCAGTATCTTCGTATAGCCATGGGACATGAAAGCGAACCCCTTGATGAGTTTGTTGAAGCACATAGAACTTGCCTTAATGATCTTATGTACTTCCCTACCCGTAATGCCTTTGGGCTTTCGAGTGTTGCTGGAAACATGGAGAAGCTTGCAGCTTTGCAGAATGAATTTGAAAATGTGAGAAAAAAGTTGGATGATGGCAAGGAGAAGGTAGTACGCCTTGAGAAGAAGGTGATGGTTCTTACACAAGGCTATGAGATGAGGGCAAAGAAAAGTCTCTGGCCACAAATCGAAGCCACATTCAAGCTGATGGACACTGCTGCAACAGAACTAGAGTGCTTCCAAGTTTTGCAAAAGCAGGAGCAGCTAGCTGCATCGCATCGGATAAACATTATATGGTCCGAAGTAGAGAAGCAAAAGGAACTTGAGAAAACCTTACAAAAGAGATATGGGGATCTTCTGGCAGAAGTGGAAAAGCTTCAGAACATTGTGAACCAATACAGGGTGCAGTCTAACCAGCAAGAAGAAGCTGCTGCTAATAAGCATTCTCTCGAGTCAGCTGAGGTTGCATCTGACGAAACGAGCACGCAGGGTATTGAGAATCATGAAGGTATATCCCACTCAGATGAGCAGGGAAGTGCTATGTTAGTTAATTCAACTCACGACGCTTCAGGACAGCAAGTAGACCTGGAACAAGCCGAGACCACTTCAGGCCCAGAAAATAATAAAGATGATGCTTTAGGACAGCAAGTAGACCTGAAACAAGCCGAGGCCACTTCAGGCCCAGAAAATAATAAAGGGCAAATGACCCACGACATTGATGTCAAGCACCAAGATGTGACACTTGTTGCAGAGGAGGGAGTCAGCACAACAGTAGTACCAGGTGAGAGCATTGATAGTTGTATAACCCACATGGAGACCACTCTAGACCCAGGTGCTCCAGAGGATACGAGTATCGAGAGACGTGGGGAGAATCAAGGATTGAAGAATCCAGATAATGTGGCCATAGACTTGCATGATGACAAGATACCAGAAAACGCCGATCTGGATTAG 2973 0.4494 MRIMIKGGVWKNTEDEILKAAVMKYGKNQWARISSLLVRKSAKQCKARWYEWLDPSIKKTEWTREEDEKLLHLAKLMPTQWRTIAPIVGRTPSQCLERYEKLLDAACVKDENYEPGDDPRKLRPGEIDPNPESKPARPDPVDMDEDEKEMLSEARARLANTKGKKAKRKAREKQLEEARRLASLQKKRELKAAGIDIRHRRRKRKGIDYNAEIPFEKRPPPGFFDVTDEDRSVEQPKFPTTIEELEGKRRIDVEAQLRKQDIAKNKISQRQDAPSAILHANKLNDPEAVRKRSKLMLPPPQISDNELEEIAKMGYASDLMGSEEIAEGSGATHALLANYAQTPSQGVTPLRTPQRTPAGKGDAILMEAENLARLRESRTPLLGGDNPELHPSDFSGVTPRKKEIQTPNPMLTPSATPGGAGLTPRSGGTPARDGFSFGMTPKGTPLRDELHINEDMDMPESTKLELRRQADLKRSLRSGLSSLPQPKNEYQIVMQPAPEDVEEPVEKIEEDMSDRIAREKAEEEARQQALLRKRSKVLQRELPRPPPASLELIRNSLIIADGDKSSFVPPTSMEQADEMVRKELLSLLEHDNAKYPLDEKVNKERKKGVKRAANGPAIVPLIEDFDEDEMKDADQLIKEEAQYLRIAMGHESEPLDEFVEAHRTCLNDLMYFPTRNAFGLSSVAGNMEKLAALQNEFENVRKKLDDGKEKVVRLEKKVMVLTQGYEMRAKKSLWPQIEATFKLMDTAATELECFQVLQKQEQLAASHRINIIWSEVEKQKELEKTLQKRYGDLLAEVEKLQNIVNQYRVQSNQQEEAAANKHSLESAEVASDETSTQGIENHEGISHSDEQGSAMLVNSTHDASGQQVDLEQAETTSGPENNKDDALGQQVDLKQAEATSGPENNKGQMTHDIDVKHQDVTLVAEEGVSTTVVPGESIDSCITHMETTLDPGAPEDTSIERRGENQGLKNPDNVAIDLHDDKIPENADLD 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01058 990 MobiDBLite consensus disorder prediction 974 990 - -
Accr1g01058 990 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 107 IPR017930 -
Accr1g01058 990 Coils Coil 167 187 - -
Accr1g01058 990 Coils Coil 783 817 - -
Accr1g01058 990 SMART sant 58 105 IPR001005 -
Accr1g01058 990 SMART sant 6 55 IPR001005 -
Accr1g01058 990 ProSiteProfiles Myb-like domain profile. 2 53 IPR001005 -
Accr1g01058 990 FunFam CDC5 cell division cycle 5-like 60 120 - -
Accr1g01058 990 Pfam pre-mRNA splicing factor component 406 655 IPR021786 -
Accr1g01058 990 ProSiteProfiles Myb-like domain profile. 54 103 IPR001005 -
Accr1g01058 990 MobiDBLite consensus disorder prediction 379 428 - -
Accr1g01058 990 MobiDBLite consensus disorder prediction 859 885 - -
Accr1g01058 990 MobiDBLite consensus disorder prediction 113 150 - -
Accr1g01058 990 MobiDBLite consensus disorder prediction 213 233 - -
Accr1g01058 990 Coils Coil 683 717 - -
Accr1g01058 990 CDD SANT_CDC5_II 55 106 IPR047240 -
Accr1g01058 990 MobiDBLite consensus disorder prediction 399 413 - -
Accr1g01058 990 FunFam CDC5 cell division cycle 5-like 5 59 - -
Accr1g01058 990 Gene3D - 60 114 - -
Accr1g01058 990 MobiDBLite consensus disorder prediction 859 884 - -
Accr1g01058 990 PANTHER CELL DIVISION CYCLE 5-LIKE PROTEIN 1 804 IPR047242 GO:0000398|GO:0000974
Accr1g01058 990 MobiDBLite consensus disorder prediction 814 847 - -
Accr1g01058 990 MobiDBLite consensus disorder prediction 947 990 - -
Accr1g01058 990 SUPERFAMILY Homeodomain-like 33 106 IPR009057 -
Accr1g01058 990 Pfam Myb-like DNA-binding domain 10 70 - -
Accr1g01058 990 CDD SANT 10 53 IPR001005 -
Accr1g01058 990 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 2 57 IPR017930 -
Accr1g01058 990 Gene3D - 5 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01058 Accr-Chr1 29706977 29713540 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01058 1 833 MYB-Related Transcription Factor Family AT1G09770 75.689 0.0 1238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr1g01058 Myb_Cef 1.2e-58 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01058 K12860 - qsa:O6P43_011261 1449.88