Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01037 ATGCTTTGGTTCTTGAACTTGAGAAAAAATAAATTTGAGGGAAGTATTCCCTTTGAGATTGGTCAGTTACAAGCTTTGCATGAACTTGACCTTAGTGAAAATATGTTGAGGGGAACAATTCCAGCAACGCTTGGAACATTAAAGATGTTGGAAAATTTGAACCTTTCACATAATAATCTCTCTGGCACCTTCTCATCTGATTTTGATGATATGTCAAGCTTGGCATCTGTTGACATATCGTTCAATCATTTAGAGGGACCTCTTCCGAACATCCCCGCCTCTCGAAACATTACATTTGAGGCAGTGAGGAACAACAAAGGTTTATGTGGTAATGTTACTAGCTCAAAGATTTGCAATAAACAAAGCAATAATTTACTCGATCGTATGGACAAAAAAGCAAAGCTACTAGTATTATTTCTGGTTAGTTTTGTGACTCTAATGCTAGTAGTTGGTGGAGTTTCGTATATTTTGATTCAAAAATCAAAGAGAAGAAAAGCTCGAACTCTCCGTCTTTTTTCCATGGGGCTTTTTAATGGGGAAATGTTTCATCAAAAAATTGTTGAGGCTACAGAAAATTTTGATGACAAATATCTCATTGGAGTTGGGGCACAAGGGAGTGTTTACAAAGCTGAGTTACTTGAGGGTCAGTTTTTCGCTGTGAAGAAAATTCATCCCCGTTGTGATACAGATTACTTCAATGTTCATAAAGCATTTTCAAGTGAAATTCAAGCATTGACAAATATTAAACATCGTAATGTCGTGAAGTTACTTGGGTTTTTTTTAAATTCAAGCCTATCATTCCTTTTGTATGAATTCCTAGAAGGAAGTAGCTTGGATAACATTTTAAAAAATGATATCCAAGCATCTAAACTTGATTGGCGTAAGAGGGTTATTGTTGTTAGAGATGTGGTTGATGCACTATTCCATATGCACCACGGTCTCTCTTGTCCCATAGTTCATCGTGACATATCAAGCAAAAACATCATAGTAGATCCTGAATATCAAGAAGCTCATATCATTGACTTTGGAATAGCCAAGTTTCTAAAGCTTGACTCGAGCAACATGACCTCATTTGTTGGCACCTATGGTTATGCGGCTCCAGAGATTGCATTTACAATGCAAGCAAATGAAAAATGCGATGTTTACAGCTTCGGTGTTCTCACATTAGAAATTCTAATGGGAAGACATCCATCAGAGCTTATATCTTCATTGATAGAAATTCGAACATCATATGATTTTCCACTTAAAGATGTATTGGATCAGCGACTTCCTCCACCCTCAAACCAAATTGTTGTGGAACTAATGTCGATTGCAAGAATTGCACTTGCATGCTTAAATGAAGATCCTCGATGCCGACCAACCATGGAACAAGTGTCTGTCAAGTTATTGAGGTCCAAACCATATTCAGTGAACCAGTTCAACAACATCACACTTGGAGAACTCATGAGAACTTAA 1455 0.3711 MLWFLNLRKNKFEGSIPFEIGQLQALHELDLSENMLRGTIPATLGTLKMLENLNLSHNNLSGTFSSDFDDMSSLASVDISFNHLEGPLPNIPASRNITFEAVRNNKGLCGNVTSSKICNKQSNNLLDRMDKKAKLLVLFLVSFVTLMLVVGGVSYILIQKSKRRKARTLRLFSMGLFNGEMFHQKIVEATENFDDKYLIGVGAQGSVYKAELLEGQFFAVKKIHPRCDTDYFNVHKAFSSEIQALTNIKHRNVVKLLGFFLNSSLSFLLYEFLEGSSLDNILKNDIQASKLDWRKRVIVVRDVVDALFHMHHGLSCPIVHRDISSKNIIVDPEYQEAHIIDFGIAKFLKLDSSNMTSFVGTYGYAAPEIAFTMQANEKCDVYSFGVLTLEILMGRHPSELISSLIEIRTSYDFPLKDVLDQRLPPPSNQIVVELMSIARIALACLNEDPRCRPTMEQVSVKLLRSKPYSVNQFNNITLGELMRT 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01037 484 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 1 118 - -
Accr1g01037 484 FunFam Leucine-rich repeat receptor protein kinase MSP1 158 272 - -
Accr1g01037 484 ProSiteProfiles Protein kinase domain profile. 193 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01037 484 ProSitePatterns Tyrosine protein kinases specific active-site signature. 318 330 IPR008266 GO:0004672|GO:0006468
Accr1g01037 484 PANTHER LEUCINE RICH REPEAT KINASE 2 2 466 - -
Accr1g01037 484 SUPERFAMILY L domain-like 2 109 - -
Accr1g01037 484 Gene3D Ribonuclease Inhibitor 1 121 IPR032675 -
Accr1g01037 484 Pfam Protein kinase domain 195 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01037 484 Gene3D Phosphorylase Kinase; domain 1 153 272 - -
Accr1g01037 484 Pfam Leucine rich repeat 25 84 IPR001611 GO:0005515
Accr1g01037 484 PRINTS Leucine-rich repeat signature 47 60 - -
Accr1g01037 484 PRINTS Leucine-rich repeat signature 26 39 - -
Accr1g01037 484 Gene3D Transferase(Phosphotransferase) domain 1 273 476 - -
Accr1g01037 484 SUPERFAMILY Protein kinase-like (PK-like) 179 460 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01037 Accr-Chr1 29054247 29055800 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01037 4 90 Receptor kinase-like Gene Family AT4G08850 42.529 2.07e-13 70.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr1g01037 Pkinase 5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01037 - - pcin:129317259 563.918