Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g01036 ATGGCATTTAAGCCGCAAATTGTTCATTCCACTCTTCCACTTGCAGCATCATGGCGAATTATCTGCATGGTCTTGTTCTGTGTCTCCGTATTGTTATCTTCATCTCTCGCTACCGAGGAAGCAAATGGTCTTTTAAAGTGGAAAACCAGCCTTACGAACAAAAGCCAAGCTATCTTGTCTTCTTGGAATGGCACTGATCCTTGCACTCACTGGAAAGGAATTACTTGTGATGAGTCCATGTCGGTCTCCACCATTAATCTTACTAGGTTGGGAATGCAAGGTACACTTCACAATCTCAACTTCTCATCCTTCACTAAGATCCGAGTTTTAGATATCAGTTACAATGAGTTTTCTGGGACTATTCCCAGCCAACTTGGCAAATTGTCCAGTATTTTATCCTTGCGTATGTATGATAATTTCTTGAGTGGTTTCATCCCTCCAGAAATAGGAGAATTGACTAATCTAAATGAGCTTGAACTTGGTGTGAATAATCTTACTGGGCAAATTCCCAAAGAAATTGGGAAGTTGAGGAATTTGGAATTCTTATCTATTTTCCTAAATCATCTATCTGGTCTCATTCCTCAAGAAATCGGAATGCTAAGTAATCTCTCAGAGTTATACTTGGGTGAAAATACTTTCTTAACCGAAGGAATCCCTTCTTCATTAGGAAACTTGACCAAATTGAAAGTTCTTTCCCTATATAACAATAGATTGTCTGGTTCCATTCCTTATGAATTTGGGAACCTCCATTCTCTCACCCAATTGCATTTGCAAGAAAACGACTTGTATGGGCCAATACCAACCTTCATTGGAAACATGACAAAACTTACCTGGTTGTATTTAGGGGTAAATAGACTTTCGGGATCAATTCCATCGTCTTTGGGAAACTTGGTCAATTTACAACTACTCGGCCTTAGAAATAACTCTCTTTCTGGAGCTATTCCAGCTACTCTAGGAAATTTGAAAAAGCTCACCTCCCTAATATTAAGATTTAACCAACTCAATGGAAGCATTCCAATGGAGATGAATAATCTTACCACCTTGGTAGATGTTCAAATTAGAGGGAATAAGTTGAGTGGCCATTTGCCCGAAAATATTTGCCTTGGTGGATCACTTGTATATTTGACTGCATCTCAAAACAAAATTAGTGGTCCGATTCCAAGAACCTTGAAAAATTGCTCTACCCTTATCAGACTCCTACTTCATGATAACCAATTGGTTGGAAATATAACGAGTGATTTTGGTGTGTATCCATATCTGGAATACATCAATTTGAGTGGCAATAAATTATATGGCCACATTTCACCGTTGTGGGGAAACAATCCAAGTCTTACAACATTTAGCATTTCCAACAACAACATTTCTGGCATTATACCTCCAGAAATAGCAAGGGCAACAAATCTTGGGGAACTCAATGTTTCTTCAAATCACTTGACAGGAGAAATTCCAAAAGAATTAGGGAAGGTGATCTCATTGACTAGACTCTCTTTGAGTCACAATAAATTTTCAGGAAAGATTCCTATAAAAATAGGATCGCTGAATCAACTTGAGAAATTGGAGTTGGCACAAAATAATCTTATTGGACCATTACCTAAAGAGCTTGGAGGCTTGCGCAGGCTTTTGTTCTTGAACTTGAGAAAAAATAAATTTGAGGGAATTATTCCTTTTGAGATTGGTCAGTTACAAGCTTTGAATGAACTTGACCTTAGTGAAAATATGTTGAGGGGAACAATTCCAGCAACACTTGGAATATTAAAGATGTTGGAAAATTTGAACCTTTCACATAATAATCTCTCTGGCACCTTCCCATCTAATTTTGATGATATGTCAAGCTTGACATCTGTTGACATATCGTTCAATCATTTAGAGGGACCTCTTCCGAACATCCCTGCCTTTCGAAACATTACATTTGAGGCAGTGAGGAACAACAAAGGTTTATGTGGTAATATTACTGGCTTAGAGATTTGCAATAAACAAAGCAATAGTCCACACGGTCGTATGGACAAAAAAGCAAAGCTACTGGTATCATTACTTGTTAGTTTTGTGACTCTAATGCTAGTAGTTGGTGGAGTTTCCTATATTTTGATTCAAAAATCAAAGAGAAGAAAAGGTCAATATGGAGAAGCTGTACCTCTCTGTCTTTTTTCCATGGGGCTTTATAATAGGGAAATGTTGCATCAAAAAGTTGTCGAGGCTACAGAAAATTTTGATGACAAATATCTCATTGGAGTTGGGGCACAAGGGAATGTTTACAAAGTTGAGTTACTTGAGGGTCAGTTTTTCGCTGTGAAGAAAATTCATCCCTGTTGTGATACAGATTACTTCAATATTCATAAAACATTTTCAAGTGAAATTCAAGCATTGACAAACATTAAACATCGTAATGTCGTGAAGTTACTTGGGTGTTTTTCAAATTCAAGCCTATCATTCCTTGTGTATGAATTCCTAGAAGGTGGTAGCTTGGATAACATTTTAAAAAATGATATTCAAGCATCTAAACTTGATTGGCTTAATAGGGTTATTGTTGTTAGAGATGTGGTTGATGCACTATTCCATATGCACCATGGTCTCTCCCGTCCCATAATTCACCGTGACATATCAAGCAAAAACATCATAGTAGATCCAAAATATCAAGAAGCTCATATCATTGACTTTGGAATAGCCAAGTTTCTAAAGCTTGACTCAAGCAACATGACCTCATTTATTGGCACCTGTGGTTACGCTGCTCCAGAGATTGCGTTTACAATGCAAGCAAACGAAAAATGTGATGTCTACAGCTTTGGTGTTCTCACATTAGAAATTCTAATGGGAAGACATCCATCAGAGTTTATATCTTCATTGATAGAAATTCCAACAGCATATGATTTGCCACTTAAAGATGTATTGGATCAGCGACTTCCTCCACCCTCAAACCAAATTGTTATGGAACTAATGTCGATTGCAAAAATTGCACTTGCATGCTTAAATGAAGATCCTCGATGCCGACCAACCATGGAACAAGTGTCTGTCAACTTATTGAGGCCCAAACCATATTCAATGAACCAGTTCAACAACATTACACTTGGAGAACTCATGAGAACTTAA 3084 0.3755 MAFKPQIVHSTLPLAASWRIICMVLFCVSVLLSSSLATEEANGLLKWKTSLTNKSQAILSSWNGTDPCTHWKGITCDESMSVSTINLTRLGMQGTLHNLNFSSFTKIRVLDISYNEFSGTIPSQLGKLSSILSLRMYDNFLSGFIPPEIGELTNLNELELGVNNLTGQIPKEIGKLRNLEFLSIFLNHLSGLIPQEIGMLSNLSELYLGENTFLTEGIPSSLGNLTKLKVLSLYNNRLSGSIPYEFGNLHSLTQLHLQENDLYGPIPTFIGNMTKLTWLYLGVNRLSGSIPSSLGNLVNLQLLGLRNNSLSGAIPATLGNLKKLTSLILRFNQLNGSIPMEMNNLTTLVDVQIRGNKLSGHLPENICLGGSLVYLTASQNKISGPIPRTLKNCSTLIRLLLHDNQLVGNITSDFGVYPYLEYINLSGNKLYGHISPLWGNNPSLTTFSISNNNISGIIPPEIARATNLGELNVSSNHLTGEIPKELGKVISLTRLSLSHNKFSGKIPIKIGSLNQLEKLELAQNNLIGPLPKELGGLRRLLFLNLRKNKFEGIIPFEIGQLQALNELDLSENMLRGTIPATLGILKMLENLNLSHNNLSGTFPSNFDDMSSLTSVDISFNHLEGPLPNIPAFRNITFEAVRNNKGLCGNITGLEICNKQSNSPHGRMDKKAKLLVSLLVSFVTLMLVVGGVSYILIQKSKRRKGQYGEAVPLCLFSMGLYNREMLHQKVVEATENFDDKYLIGVGAQGNVYKVELLEGQFFAVKKIHPCCDTDYFNIHKTFSSEIQALTNIKHRNVVKLLGCFSNSSLSFLVYEFLEGGSLDNILKNDIQASKLDWLNRVIVVRDVVDALFHMHHGLSRPIIHRDISSKNIIVDPKYQEAHIIDFGIAKFLKLDSSNMTSFIGTCGYAAPEIAFTMQANEKCDVYSFGVLTLEILMGRHPSEFISSLIEIPTAYDLPLKDVLDQRLPPPSNQIVMELMSIAKIALACLNEDPRCRPTMEQVSVNLLRPKPYSMNQFNNITLGELMRT 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g01036 1027 SUPERFAMILY L domain-like 50 291 - -
Accr1g01036 1027 FunFam Leucine-rich repeat receptor protein kinase EMS1 242 341 - -
Accr1g01036 1027 FunFam Leucine-rich repeat receptor protein kinase MSP1 700 815 - -
Accr1g01036 1027 SMART LRR_typ_2 225 248 IPR003591 -
Accr1g01036 1027 SMART LRR_typ_2 561 583 IPR003591 -
Accr1g01036 1027 SMART LRR_typ_2 585 608 IPR003591 -
Accr1g01036 1027 SMART LRR_typ_2 273 296 IPR003591 -
Accr1g01036 1027 SMART LRR_typ_2 513 537 IPR003591 -
Accr1g01036 1027 SMART LRR_typ_2 321 345 IPR003591 -
Accr1g01036 1027 SMART LRR_typ_2 152 176 IPR003591 -
Accr1g01036 1027 SMART LRR_typ_2 200 221 IPR003591 -
Accr1g01036 1027 SMART LRR_typ_2 297 320 IPR003591 -
Accr1g01036 1027 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 346 660 - -
Accr1g01036 1027 Gene3D Phosphorylase Kinase; domain 1 701 815 - -
Accr1g01036 1027 ProSiteProfiles Protein kinase domain profile. 736 1012 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01036 1027 PANTHER LEUCINE RICH REPEAT KINASE 2 270 1010 - -
Accr1g01036 1027 Gene3D Ribonuclease Inhibitor 214 343 IPR032675 -
Accr1g01036 1027 Gene3D Transferase(Phosphotransferase) domain 1 816 1018 - -
Accr1g01036 1027 Pfam Protein kinase domain 738 1001 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g01036 1027 SUPERFAMILY RNI-like 255 628 - -
Accr1g01036 1027 FunFam Nuclear pore complex protein NUP107 37 193 - -
Accr1g01036 1027 Gene3D Ribonuclease Inhibitor 37 213 IPR032675 -
Accr1g01036 1027 ProSitePatterns Tyrosine protein kinases specific active-site signature. 861 873 IPR008266 GO:0004672|GO:0006468
Accr1g01036 1027 Pfam Leucine rich repeat N-terminal domain 39 77 IPR013210 -
Accr1g01036 1027 Pfam Leucine rich repeat 275 334 IPR001611 GO:0005515
Accr1g01036 1027 Pfam Leucine rich repeat 201 262 IPR001611 GO:0005515
Accr1g01036 1027 Pfam Leucine rich repeat 563 622 IPR001611 GO:0005515
Accr1g01036 1027 SUPERFAMILY Protein kinase-like (PK-like) 720 1002 IPR011009 -
Accr1g01036 1027 SMART LRR_sd22_2 273 299 - -
Accr1g01036 1027 SMART LRR_sd22_2 225 251 - -
Accr1g01036 1027 SMART LRR_sd22_2 561 593 - -
Accr1g01036 1027 SMART LRR_sd22_2 321 347 - -
Accr1g01036 1027 SMART LRR_sd22_2 152 181 - -
Accr1g01036 1027 SMART LRR_sd22_2 513 532 - -
Accr1g01036 1027 SMART LRR_sd22_2 200 220 - -
Accr1g01036 1027 Gene3D Ribonuclease Inhibitor 344 664 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g01036 Accr-Chr1 28969343 28972522 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g01036 24 914 Receptor kinase-like Gene Family AT4G08850 42.353 0.0 662
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr1g01036 Pkinase 2.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g01036 - - pcin:129318235 1034.63