Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00983 ATGGCCTCGCCGATACCAGGTAACTCTCGATCAACTTCTCTCAGGGATGACGACTCCGACACTGCCAAGCTCGAAGGCACCGGTAGCTGGGACGCCCTCGAATGGACCAAAATTGAGCCCATCATACGCCCCGTTTCGCGGGAAAATTTGGATTTCTTGTTTGAGGCTGAGCAAGTCAAAGCCCAAGAATATGGTGTTTCGTTTGTTAATAACAACGATTTGGGTACATTAATGGTTACAAATTTTCGCCTCTTATTTCTGAGTGAGAAAACCTCAAAAGTTATTGGCCTTGGAACGATTCCACTTGCAACAATCGAGAAGTTTACCAAGATAGCTTTGAAGACTCAATCAACTCTTCGTCAGTCAGACAAAACACAATCACAGAGATTGCTCCAAGTCATTGGAAAGGATATGAGAATTATTGTTTTTGGTTTCAGACCTCGTACAAAACAGAGACGTGCGATATTTGAAGCATTACTGAGATTGACAAAACCTGCAAGACTTTGGGATCTCTATGCTTTTGTATCAGGGACTTCTAGATTAAACAACTCGAACCCAAAAGTTCGCTTACTGGATGAGTATTTTCGACTTCTTGGGATAGGATCTTATCGTGGATCAATCAATATGATCAAAAGTGGGTCCTTTACCTTGTCAAATGCCTCTTGGAGAATAAGTAGTGTGAATTCCAACTATACTATGTGTCCGACATATCCATTTGCATTGATTGTTCCTGAGAGCATTAGTGATGATGAAGTGCTCCAAGCTTCCACATTTCGGGCAAGATGTCGGTTGCCTGTAGTCTCATGGTGTGATCCTGGTTCTGGTGCTGTCCTTGCTCGATCATCCCAACCCTTAGTTGGTCTCATGATGAATATGAGAAGCAACACAGATGAAAAGCTTGTGGCTGCACTTTGCAACAAACTGGATGATGGTTCACGGAGGAAGCTATATATTTCTGACGCAAGACCAAGAAAAAATGCATTAGCTAATGGGGCCATGGGAGGTGGTTCAGAGTCATCATCAAATTACTTTCAATCTGAGATAGTCTTCTTTGGGATATCCAACATCCACGCAATGAGAGATAGCTTTGCTAGACTTAGAGAGTACTTAGATACTTATGGAAGAACATCATCAGATGGAATGTCATCTTTATTGAGAAATGGTGGGTGGACATGGGGTGGAGGATTACTAAGTAGTATGTCTGCTTCAGTATCAATGCTTGGGGACAGTGGATGGTTGCTGCACATTCAAAATGTCTTGGCTGGTTCAGCTTGGATTGCAGCTCGTGTTGCTAAAGAAAAGGCCTCTGTGCTTGTACATTGCAGTGATGGGTGGGATAGAACAACTCAATTGGTTTCACTTGCTAGTTTGTTGCTTGATCCATACTATCGGACGATCAAAGGGTTTCAGGCACTTGTTGAAAAAGACTGGCTAGCATTTGGTCATCCATTCTCAGATCGTGTTGGAATGCCATCGTTCACTGGAAGTGGCAACACACCTTCTGAGTTGTCTTGGCATTCTTCTGGAAATTACCCATCACCACCCATGAATCAATCATCAGGAGCATTCAGTTCCCAACCTCCAACCACTCATGCACAAACTTCAAACAACTACTCTCCAATTTTCCTGCAGTGGGTTGATTGTGTTTCACAGTTGCTGCGGACATATCCTTTTGCTTTCGAGTTCTCCTCCGCTTTCCTGGTGGACTTCTTAGACTGTGTGCTTTCTTGCCGCTTTGGAAACTTTTTATGTAACAGCGAGAAGGAAAGGCAGCAATTGAATGTTTTTGAAGCTTGTGGATGTTTGTGGGCGTACCTAGCTGAGTTGCGTGCTTCAGAGAGTGGTTCTCATGTGCATTATAACCTCTTTTACAAACCGTCAAAGCACAATGGTCATCTTCTACCTCCAGCAGCAGCTTTGGCCCCAACTTTGTGGCCCCAATTTCATCTTCGTTGGGTTTGTCATGAAGAATCACAGGCTGGGCAGATTGAAGTAGAATGTAGGAAGATGGCTTTAAATTTCTCTGAGATGAGGAAGGCTAAAGAAGTGGCAGAGAGGAAAGCCAAAGAAATTTCTAATGCCATGGAATCACTGAAATTAGAACATAGAAACGAGAAGCAACTTAGAATATCAGCAATGAATATAGCCAAAAGGAAAAACAAAGAAAATGTGGTGATGAAGAGGGCAATTCAGTCAATGGGATGCAAAGTTTGCTTCTCTAGCAGCGATGCTAGTATTGTTGATATTGAGATCTGCCCAGCCGAAGCAGCACAAAACTTGAAGTATTCTCTAACCAGAAAGGAATTTGGTGATAAAATGGATTTGTCTGCTTCAGAAACAATTACAGAAGATGACAATGATGCAAACAATGCTTTTAGTCAAGCATGTGAAACTCTATGCCCATTCCGCACCCAAGACGGATGCTGCAGGTGGCCCAATGCCGCTTGTGCTCATCGTGGCAGCCAGTTTGTTGGTCTAAAGGCAAATTTTGATGCTCTTGATCAACTCTTAATTGATGATGATTATTTCAAGCCTGAGTGA 2541 0.429 MASPIPGNSRSTSLRDDDSDTAKLEGTGSWDALEWTKIEPIIRPVSRENLDFLFEAEQVKAQEYGVSFVNNNDLGTLMVTNFRLLFLSEKTSKVIGLGTIPLATIEKFTKIALKTQSTLRQSDKTQSQRLLQVIGKDMRIIVFGFRPRTKQRRAIFEALLRLTKPARLWDLYAFVSGTSRLNNSNPKVRLLDEYFRLLGIGSYRGSINMIKSGSFTLSNASWRISSVNSNYTMCPTYPFALIVPESISDDEVLQASTFRARCRLPVVSWCDPGSGAVLARSSQPLVGLMMNMRSNTDEKLVAALCNKLDDGSRRKLYISDARPRKNALANGAMGGGSESSSNYFQSEIVFFGISNIHAMRDSFARLREYLDTYGRTSSDGMSSLLRNGGWTWGGGLLSSMSASVSMLGDSGWLLHIQNVLAGSAWIAARVAKEKASVLVHCSDGWDRTTQLVSLASLLLDPYYRTIKGFQALVEKDWLAFGHPFSDRVGMPSFTGSGNTPSELSWHSSGNYPSPPMNQSSGAFSSQPPTTHAQTSNNYSPIFLQWVDCVSQLLRTYPFAFEFSSAFLVDFLDCVLSCRFGNFLCNSEKERQQLNVFEACGCLWAYLAELRASESGSHVHYNLFYKPSKHNGHLLPPAAALAPTLWPQFHLRWVCHEESQAGQIEVECRKMALNFSEMRKAKEVAERKAKEISNAMESLKLEHRNEKQLRISAMNIAKRKNKENVVMKRAIQSMGCKVCFSSSDASIVDIEICPAEAAQNLKYSLTRKEFGDKMDLSASETITEDDNDANNAFSQACETLCPFRTQDGCCRWPNAACAHRGSQFVGLKANFDALDQLLIDDDYFKPE 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00983 846 Pfam Myotubularin-like phosphatase domain 187 591 IPR010569 -
Accr1g00983 846 MobiDBLite consensus disorder prediction 499 532 - -
Accr1g00983 846 ProSiteProfiles Myotubularin phosphatase domain. 199 649 IPR010569 -
Accr1g00983 846 ProSitePatterns Tyrosine specific protein phosphatases active site. 439 449 IPR016130 GO:0016311|GO:0016791
Accr1g00983 846 Gene3D - 59 163 IPR011993 -
Accr1g00983 846 PANTHER MYOTUBULARIN-RELATED 64 761 IPR030564 -
Accr1g00983 846 CDD PTP-MTM-like 262 551 - -
Accr1g00983 846 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 217 653 IPR029021 -
Accr1g00983 846 Coils Coil 674 708 - -
Accr1g00983 846 SUPERFAMILY PH domain-like 54 175 - -
Accr1g00983 846 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00983 Accr-Chr1 26726142 26767441 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00983 1 846 Protein tyrosine phosphatase (PTP) family AT3G10550 64.033 0.0 1104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00983 K18081 - gmx:100781842 1202.58