Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00979 ATGTTGGCGATGGAGAAGGATTTTGATTCCATGTTGAGGATTCAGAGTAATTCGTCTAGTGATGGGAGTGTCCAGAGATCTCAAAGCATTCCTTTCCGAGCTCCTCAGGAGAATTGCACCATCCAGGACTTTGAATTGGGGAAGATCTACGGCGTTGGTTCTTATTCTAAGGTTGTGAGAGCAAAGAAGAAGGATACGGGATCTGTATATGCCTTGAAGATCATGGACAAAAAATTTATCTCCAAGGAGAACAAAACAGCTTATGTGAAGTTGGAACGGTTAGTGCTCGATAAATTGGATCATCCTGGCATTGTGCGGCTGTACTTCACATTTCAAGACACTTTTTCTCTGTACATGGCACTTGAATCCTGTGAAGGTGGAGAACTTTTTGATCAAATAACCAGGAAAGGCCGATTGTCTGAGGATGAAGCACGATTCTATGCAGCTGAAGTTGTGGATGCTCTTGAGTACATCCATAATTTGGGCTTGATACATCGTGATATCAAGCCAGAGAACTTGCTGCTTACAGCTGAAGGACATATTAAAATCGCTGATTTTGGGAGCGTCAAGCCTATGCAGGGTTGCAAAATCATGGACTTCCTTCCAAAGGCAGCATCAGATGATAGAGCCAGCACATTTGTGGGGACAGCTGCTTATGTCCCACCAGAGGTTCTTAATCCTTCTCCAGCAACATTTGGAAATGACCTCTGGGCCCTTGGATGCACATTATACCAAATGCTGTCAGGAACTTCTCCTTTTAAAGATGCGAGTGAATGGCTTATTTTCCAAAGAATTATAGCTAGAAATATTCAATTTCCGGACTATTTTTCGGATGAGGCTAGGGACCTTATTGACCGGTTACTGGATTTGGATCCCAGCAGGAGGCCAGGTGCCGGACCTAATGGTTATACTGTTTTGAAAAAGCATCCATTTTTCAAGGGAGTGGACTGGAGTAAAATTAGGCATCAAATGCCCCCAAAACTTGCTATGGAACTTGAGTCACCGGAAGGTGATGATGTTTATGATTCGTCATGGAACCTTTCTCACGTTGGTGATAGTTCTAGGCAACCTGAAGGAAATATTGGTGCTGCATCATCTGAGGAGTTTGGTCACATAACTAGGCTAGGCTCAATAGATTCTTTTGATTCAAAGTGGCAACAATTTTTGGATCCTAGTGAATCTGTTATTATGATCTCAATGGTAAAAAAGATGCAGAAATTGACAAGCAAGAAGGTGCAGCTTATCCTTACCAACAAACCAAAGCTAATCTATGTGGATCCATCAAAGCTTATTGTGAAGGGAAATATAATGTGGTCTAATAATCCAGATGAATTAAGCATTCAAGTGACAAGTCCATCTGGTTTCAAGATTTGCACGCCAAAAAAGGTATTGTCATTTGAGGATGTTAAGCAAAGAGCTTATCAGTGGAAGAAAGCAATTGAAGGGCTACAAAACCGGTGA 1461 0.4189 MLAMEKDFDSMLRIQSNSSSDGSVQRSQSIPFRAPQENCTIQDFELGKIYGVGSYSKVVRAKKKDTGSVYALKIMDKKFISKENKTAYVKLERLVLDKLDHPGIVRLYFTFQDTFSLYMALESCEGGELFDQITRKGRLSEDEARFYAAEVVDALEYIHNLGLIHRDIKPENLLLTAEGHIKIADFGSVKPMQGCKIMDFLPKAASDDRASTFVGTAAYVPPEVLNPSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIIARNIQFPDYFSDEARDLIDRLLDLDPSRRPGAGPNGYTVLKKHPFFKGVDWSKIRHQMPPKLAMELESPEGDDVYDSSWNLSHVGDSSRQPEGNIGAASSEEFGHITRLGSIDSFDSKWQQFLDPSESVIMISMVKKMQKLTSKKVQLILTNKPKLIYVDPSKLIVKGNIMWSNNPDELSIQVTSPSGFKICTPKKVLSFEDVKQRAYQWKKAIEGLQNR 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00979 486 ProSitePatterns Serine/Threonine protein kinases active-site signature. 163 175 IPR008271 GO:0004672|GO:0006468
Accr1g00979 486 ProSiteProfiles Protein kinase domain profile. 44 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00979 486 CDD STKc_PDK1 42 312 IPR039046 GO:0004674
Accr1g00979 486 SMART serkin_6 44 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00979 486 Gene3D Phosphorylase Kinase; domain 1 42 127 - -
Accr1g00979 486 Gene3D - 364 486 IPR011993 -
Accr1g00979 486 Pfam Protein kinase domain 46 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00979 486 FunFam 3-phosphoinositide-dependent protein kinase 2-like 128 327 - -
Accr1g00979 486 FunFam 3-phosphoinositide-dependent protein kinase 2-like 42 127 - -
Accr1g00979 486 SUPERFAMILY PH domain-like 306 485 - -
Accr1g00979 486 SUPERFAMILY Protein kinase-like (PK-like) 23 343 IPR011009 -
Accr1g00979 486 FunFam 3-phosphoinositide-dependent protein kinase 1 357 486 - -
Accr1g00979 486 Gene3D Transferase(Phosphotransferase) domain 1 128 328 - -
Accr1g00979 486 PANTHER SERINE/THREONINE-PROTEIN KINASE 27 335 - -
Accr1g00979 486 Pfam PH domain 383 485 IPR033931 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00979 Accr-Chr1 26618153 26629577 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00979 1 486 AGC Kinase Gene Family AT3G10540 77.642 0.0 773
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PDK1 Accr1g00979 Pkinase 3.5e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00979 K06276 - cave:132164552 800.431