Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00973 ATGGGTAAGTACTCCGATGCTCATATTTGCCAGTGTCTGAGTCGATTGCTATCTTCCCGGCGAAATCTTCCGGTCACAATTACCAATGACCGGCACAAAACTGGAGAACAGTTCGTGTGTGAAGTAGTAGCATTGGCCAACGGCCTTCAAGAATTTGGAATTAAAGCTGGGGACGTTGTCGCCATCTCTGCTTACAACAGTGATTTGTATCTGGAGTGGTTATTAGCTATTGCATTTGTTGGAGGGATAGCTTCTCCCCTGAACTATCGATGGAGCACTCAGGAGGCAATATTAGCAATTAACTCAGTGAGACCAGTGATGTTGGTTGCTGATGAGAGTTGTTACTCCTGGTTCATAAACCTCGGGAAAGAGGATATCCCATCTCTTAGGTGGCATGTCTTTATAGGCTCCCCTTCCACAGATTTTTGCAAGAAATGGAATGTACTAACTCCAGAATTACTCAAGAAGCATCTAACAAAGCTTCCGCCATTTCGTTTCTCCTGGGCTCCGAAAGGCGCTGTTGTAATATGCTTCACTTCAGGAACCACGGGAAAACCCAAGGGAGTCACCCTAAGCCATTCAGCTCTGTTCATACAATCTCTAGCAAAGATTGCCATTGTTGGGTACAGTGAGGATGATATCTATTTGCATACTGCTCCATTGTGCCATATTGGTGGACTGTCATCGGCAATGGCCATGCTAATGGTCGCCGGTTGCCATGTCTTGATGCCAAAGTTTGATGCCCCATCGGCTGTTGATGCCATAGAGCAATATGCTGTCACATCTCTAATCACAGTCCCTGCAATAATGGCTGATATGGTGTTTTTAATTAGGGGCAAAGAGACCTGGAAAGGTGGGGAATCTGTCAAGAAAATACTTAACGGAGGTGGGAGCCTCTCGAATGAGCTCATCATGTACTCCAGTATGTTCTTCCCTAAAGCTAAGCTTATCTCAGCTTATGGGATGACTGAGACTTGCTCTTCACTGACATTCCTGACCCTCTATGACTCGAATCAAGAAAAGATTGGTCAGTCCTCTCAGATAGCTGTGAAAAAAAGATCTGATACTATAAAATACTCTCAAGGTGTCTGTGTTGGCAAGGCTGCTCCCCATGTAGAACTTAGTATATGTGCAGATGCCTCTGGTCATGTTGGGAGAATTTTAACTAGAGGACCACATGTAATGATCCGATATTGGGATCAAACTCCGACAAGCCCATTAGATTCCTCAAATGAAAGCTGGCTTGACACAGGTGACATCGGATCAATTGATCACAATGGTAATTTATGGCTCCTTGGACGAACGAATGGTCGGATCAAGAGTGGTGGAGAGAACATCTATCCTGAAGAGGTTGAAGCAATTCTTCTGGACCATTCTGGAATTGCTGGTGTGGTGATTGTTGGAATTCCTGATGCTCGCTTGACCGAAATGGTAGTTGCCTGTATCCAACCAAGAAAAGATTGGAAATGGTCAGAGCAGTCTGTTTCAGAAGATCATCACTTATCACCAGAGAATCTTAGGCAAGATTGCATGAAAAAGAACTTAAGCAGGTTTAAGATACCAAAAATGTTTATTTTGTGGAGGAAGCCTTTTCCACTCACTACCACGGGAAAAATAAGGAGAGGTCAACTCCGAAAAGAACTCATTTATCAACTGCATTCTTTGCATAGTAATATTTGA 1680 0.4381 MGKYSDAHICQCLSRLLSSRRNLPVTITNDRHKTGEQFVCEVVALANGLQEFGIKAGDVVAISAYNSDLYLEWLLAIAFVGGIASPLNYRWSTQEAILAINSVRPVMLVADESCYSWFINLGKEDIPSLRWHVFIGSPSTDFCKKWNVLTPELLKKHLTKLPPFRFSWAPKGAVVICFTSGTTGKPKGVTLSHSALFIQSLAKIAIVGYSEDDIYLHTAPLCHIGGLSSAMAMLMVAGCHVLMPKFDAPSAVDAIEQYAVTSLITVPAIMADMVFLIRGKETWKGGESVKKILNGGGSLSNELIMYSSMFFPKAKLISAYGMTETCSSLTFLTLYDSNQEKIGQSSQIAVKKRSDTIKYSQGVCVGKAAPHVELSICADASGHVGRILTRGPHVMIRYWDQTPTSPLDSSNESWLDTGDIGSIDHNGNLWLLGRTNGRIKSGGENIYPEEVEAILLDHSGIAGVVIVGIPDARLTEMVVACIQPRKDWKWSEQSVSEDHHLSPENLRQDCMKKNLSRFKIPKMFILWRKPFPLTTTGKIRRGQLRKELIYQLHSLHSNI 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00973 559 Gene3D - 3 436 IPR042099 -
Accr1g00973 559 SUPERFAMILY Acetyl-CoA synthetase-like 8 550 - -
Accr1g00973 559 CDD AFD_class_I 175 540 - -
Accr1g00973 559 Gene3D - 437 551 IPR045851 -
Accr1g00973 559 PANTHER ACYL-COA SYNTHETASE 5 548 - -
Accr1g00973 559 Pfam AMP-binding enzyme 24 441 IPR000873 -
Accr1g00973 559 Pfam AMP-binding enzyme C-terminal domain 450 538 IPR025110 -
Accr1g00973 559 ProSitePatterns Putative AMP-binding domain signature. 176 187 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00973 Accr-Chr1 26431053 26439448 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00973 34 554 Monolignol Biosynthesis Gene Families AT4G05160 26.143 1.06e-35 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00973 K14760 - gmx:100809925 796.578