Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00965 ATGCTTCTCTTCTCATATGGCGTTAATGTTCCCTTCTCTTTTGGTTCTTCAGAACCAGAATTGCTTCTCAAGTTCAGGCACTCTTTGCAATACGAAAACGATACTGCGTTTTCCACTTGGAATATGTCTATGTCACCGCCGTGTTCTGGTGATAGTCCTAATTGGGTTGGAGTTCTCTGTACAGAAGAAGGCAGAATCTCTGGATTGATACTTGAGAATATGAGACTTAAAGGTCTCATTGATGTGGGCGCTCTTCAAAAGTTGCCTAATCTTAGAACCTTAAGTTTCAATAACAATAATTTCAATATTACTTGGCCAGAATTGAACAAGCTCTATCCTCTCAAGACATTTTATCTTTCGAATAATAAGTTTTATGGAGAGATTCCTGCTCGGAGTTTTCAGAGGATGAATTGGTTGAAGAAAGTTCATTTAGCGAATAATCAGTTCTCTGGTGAAATTCCCACTTCATTGGCCACGTTACCCAGACTTATGGAGCTGAGATTAGAGGGAAACAAATTCAGTGGCCAAATTCCCAACTTTCTGCAGAAGAGCTTGAAATCTTTTAGTGTAGCCAACAATCAGTTGCAGGGTAAAATACCTGGCAGCCTTAGTGCACTTCCAGTCTCATCCTTCGCCGGCAATGAAGCCTTATGTGGGACTCCATTGAGTGCTTGTCATTCCTTTGAAAGCCCCTCAATCATCACCGTTGTGTTGATTGCCATAGCGGTGGGCGTGGCAGTAATGATCATAGGATTACTAATCTTTCTCTTTCGTTGGAGAAAAAGACGGCGAATGACCGTGTCGTTGGAGATTCCACTATCAAATCAGATAAGGAGGACTCGTTTCAGGGAAGCAGATGAAGTAAGTAATCACTCAAGAACATCACAGGTTTCCAACCACAGTAGAAGATTAGAGAACATAAAGTTGTGCTTTGTAAGAAAAGACACAGAGAAATTTGATTTTCATGAGTTACTAAGAGCCTCAGCTGAAATTTTGGGCAATGGCAGCTACAGTTCTTCGTATAAGGCTGCTCTGCTGAATGGCTCAATGATGGTGGTGAAGAGGTTTAAGCAAATGAACAATGTTGGGAAGGAAGAGTTTCAGGAACACATGAGGAGGATAGGAAGGTTGGATCACCCTAATTTGCTTCCTCTGTTGGCTTACTATTACAGAAAGGAGGAGAAACTGTTGGTTACAGACTATGTTCAAAATGGTAGCTTGGCAGTTCGCCTTCATGGACCCCATGATGCAGGAAAGGCAGGCCTTGATTGGCCAACACGATTGAAGATTGTGAAGGGAATCACAAAATGTCTTGAATATCTCTACAAGGAACTGCCAAGCCTAATTGCACCCCACGGCCATCTCAAATCTTCAAATGTTCTCCTTACTCAATCTAATGAGCCCCTTTTAACAGACTACGGCTTAGCTCCAGTAATAAACCAAGATCTTGCTCAGGACATGATGGTCATTTATCGGTCCCCTGAGTATACACATGAGGGTCAGATTACTAAGAAGACAGATGTATGGAGTCTTGGGGTACTAATTTTGGAGATATTGAGTGGGAGATGTGCAGATAAAGGAGAGATGGATTTGGTTGGTTGGGTGAAATGTGTGGAGCCAGAATATTGGAGCAGTGAGTTTTTGGATGAAGAAATGGGAGGAACAAGGAACAGTGAAGGGGAGATAGTGAAGCTTTTGAGGATTGCGTTGTGTTGTTGTGAAGACGATGTTAATAACAGACTGGATTTGAAAGAAGTGGTTGAGAAAATTCAAGAAGTGAGGGAGAGGGAACATGATGATGATTTCTATTCATATGCTAGTGAAGGTGAAACTCATCAGTCTGATGAAATCAATTTCCCCTTTAATGCTTGA 1872 0.4172 MLLFSYGVNVPFSFGSSEPELLLKFRHSLQYENDTAFSTWNMSMSPPCSGDSPNWVGVLCTEEGRISGLILENMRLKGLIDVGALQKLPNLRTLSFNNNNFNITWPELNKLYPLKTFYLSNNKFYGEIPARSFQRMNWLKKVHLANNQFSGEIPTSLATLPRLMELRLEGNKFSGQIPNFLQKSLKSFSVANNQLQGKIPGSLSALPVSSFAGNEALCGTPLSACHSFESPSIITVVLIAIAVGVAVMIIGLLIFLFRWRKRRRMTVSLEIPLSNQIRRTRFREADEVSNHSRTSQVSNHSRRLENIKLCFVRKDTEKFDFHELLRASAEILGNGSYSSSYKAALLNGSMMVVKRFKQMNNVGKEEFQEHMRRIGRLDHPNLLPLLAYYYRKEEKLLVTDYVQNGSLAVRLHGPHDAGKAGLDWPTRLKIVKGITKCLEYLYKELPSLIAPHGHLKSSNVLLTQSNEPLLTDYGLAPVINQDLAQDMMVIYRSPEYTHEGQITKKTDVWSLGVLILEILSGRCADKGEMDLVGWVKCVEPEYWSSEFLDEEMGGTRNSEGEIVKLLRIALCCCEDDVNNRLDLKEVVEKIQEVREREHDDDFYSYASEGETHQSDEINFPFNA 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00965 623 FunFam pollen receptor-like kinase 1 294 401 - -
Accr1g00965 623 CDD TM_EGFR-like 235 264 - -
Accr1g00965 623 Pfam Protein kinase domain 329 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00965 623 Gene3D Ribonuclease Inhibitor 108 231 IPR032675 -
Accr1g00965 623 Gene3D Ribonuclease Inhibitor 13 107 IPR032675 -
Accr1g00965 623 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 12 596 IPR046959 -
Accr1g00965 623 SUPERFAMILY Protein kinase-like (PK-like) 329 592 IPR011009 -
Accr1g00965 623 Pfam Leucine rich repeat 114 173 IPR001611 GO:0005515
Accr1g00965 623 Gene3D Transferase(Phosphotransferase) domain 1 402 613 - -
Accr1g00965 623 Pfam Leucine rich repeat N-terminal domain 18 60 IPR013210 -
Accr1g00965 623 Gene3D Phosphorylase Kinase; domain 1 285 401 - -
Accr1g00965 623 FunFam Nuclear pore complex protein NUP107 15 179 - -
Accr1g00965 623 SUPERFAMILY L domain-like 20 223 - -
Accr1g00965 623 ProSiteProfiles Protein kinase domain profile. 326 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00965 Accr-Chr1 24143911 24147018 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00965 13 614 Receptor kinase-like Gene Family AT5G35390 49.685 0.0 585
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Accr1g00965 Pkinase 5.2e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00965 - - pcin:129292199 978.778