Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00964 ATGGCACTTCGTGGTACGACTTATTATAATTCATGTCTTCGAGTGATCATATTGATGCTTCTCTTCTCATATGGCGTTAATGTTCCCTTCTCTTTTGGTTCTTCAGAACCAGAATTGCTTCTCAAGTTCAGGCACTCTTTGCAATACGAAAACGATACTGCGTTTTCCACTTGGAATATGTCTATGTCACCGCCGTGTTCTGGTGATAGTCCTAATTGGGTTGGAGTTCTCTGTACAGAAGAAGGCAGAATCTCTGGATTGATACTTGAGAATATGAGACTTAAAGGTCTCATTGATGTGGGCGCTCTTCAAAAGTTGCCTAATCTTAGAACCTTAAGTTTCAATAACAATAATTTCAATATTACTTGGCCAGAATTGAACAAGCTCTATCCTCTCAAGACATTTTATCTTTCGAATAATAAGTTTTATGGAGAGATTCCTGCTCGGAGTTTTCAGAGGATGAATTGGTTGAAGAAAGTTCATTTAGCGAATAATCAGTTCTCTGGTGAAATTCCCACTTCATTGGCCACGTTACCCAGACTTATGGAGCTGAGATTAGAGGGAAACAAATTCAGTGGCCAAATTCCCAACTTTCTGCAGAAGAGCTTGAAATCTTTTAGTGTAGCCAACAATCAGTTGCAGGGTAAAATACCTGGCAGCCTTAGTGCACTTCCAGTCTCATCCTTCGCCGGCAATGAAGCCTTATGTGGGACTCCATTGAGTGCTTGTCATTCCTTTGAAAGCCCCTCAATCATCACCGTTGTGTTGATTGCCATAGCGGTGGGCGTGGCAGTAATGATCATAGGATTACTAATCTTTCTCTTTCGTTGGAGAAAAAGACGGCGAATGACCGTGTCGTTGGAGATTCCACTATCAAATCAGATAAGGAGGACTCGTTTCAGGGAAGCAGATGAAGTAAGTAATCACTCAAGAACATCACAGGTTTCCAACCACAGTAGAAGATTAGAGAACATAAAGTTGTGCTTTGTAAGAAAAGACACAGAGAAATTTGATTTTCATGAGTTACTAAGAGCCTCAGCTGAAATTTTGGGCAATGGCAGCTACAGTTCTTCGTATAAGGCTGCTCTGCTGAATGGCTCAATGATGGTGGTGAAGAGGTTTAAGCAAATGAACAATGTTGGGAAGGAAGAGTTTCAGGAACACATGAGGAGGATAGGAAGGTTGGATCACCCTAATTTGCTTCCTCTGTTGGCTTACTATTACAGAAAGGAGGAGAAACTGTTGGTTACAGACTATGTTCAAAATGGTAGCTTGGCAGTTCGCCTTCATGGACCCCATGATGCAGGAAAGGCAGGCCTTGATTGGCCAACACGATTGAAGATTGTGAAGGGAATCACAAAATGTCTTGAATATCTCTACAAGGAACTGCCAAGCCTAATTGCACCCCACGGCCATCTCAAATCTTCAAATGTTCTCCTTACTCAATCTAATGAGCCCCTTTTAACAGACTACGGCTTAGCTCCAGTAATAAACCAAGATCTTGCTCAGGACATGATGGTCATTTATCGGTCCCCTGAGTATACACATGAGGGTCAGATTACTAAGAAGACAGATGTATGGAGTCTTGGGGTACTAATTTTGGAGATATTGAGTGGGAGATGTGCAGATAAAGGAGAGATGGATTTGGTTGGTTGGGTGAAATGTGTGGAGCCAGAATATTGGAGCAGTGAGTTTTTGGATGAAGAAATGGGAGGAACAAGGAACAGTGAAGGGGAGATAGTGAAGCTTTTGAGGATTGCGTTGTGTTGTTGTGAAGACGATGTTAATAACAGACTGGATTTGAAAGAAGTGGTTGAGAAAATTCAAGAAGTGAGGGAGAGGGAACATGATGATGATTTCTATTCATATGCTAGTGAAGGTGAAACTCATCAGTCTGATGAAATCAATTTCCCCTTTAATGCTTGA 1926 0.4159 MALRGTTYYNSCLRVIILMLLFSYGVNVPFSFGSSEPELLLKFRHSLQYENDTAFSTWNMSMSPPCSGDSPNWVGVLCTEEGRISGLILENMRLKGLIDVGALQKLPNLRTLSFNNNNFNITWPELNKLYPLKTFYLSNNKFYGEIPARSFQRMNWLKKVHLANNQFSGEIPTSLATLPRLMELRLEGNKFSGQIPNFLQKSLKSFSVANNQLQGKIPGSLSALPVSSFAGNEALCGTPLSACHSFESPSIITVVLIAIAVGVAVMIIGLLIFLFRWRKRRRMTVSLEIPLSNQIRRTRFREADEVSNHSRTSQVSNHSRRLENIKLCFVRKDTEKFDFHELLRASAEILGNGSYSSSYKAALLNGSMMVVKRFKQMNNVGKEEFQEHMRRIGRLDHPNLLPLLAYYYRKEEKLLVTDYVQNGSLAVRLHGPHDAGKAGLDWPTRLKIVKGITKCLEYLYKELPSLIAPHGHLKSSNVLLTQSNEPLLTDYGLAPVINQDLAQDMMVIYRSPEYTHEGQITKKTDVWSLGVLILEILSGRCADKGEMDLVGWVKCVEPEYWSSEFLDEEMGGTRNSEGEIVKLLRIALCCCEDDVNNRLDLKEVVEKIQEVREREHDDDFYSYASEGETHQSDEINFPFNA 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00964 641 Pfam Protein kinase domain 347 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00964 641 Gene3D Ribonuclease Inhibitor 34 152 IPR032675 -
Accr1g00964 641 SUPERFAMILY Protein kinase-like (PK-like) 347 610 IPR011009 -
Accr1g00964 641 ProSiteProfiles Protein kinase domain profile. 344 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00964 641 Gene3D Ribonuclease Inhibitor 153 243 IPR032675 -
Accr1g00964 641 FunFam pollen receptor-like kinase 1 312 419 - -
Accr1g00964 641 Pfam Leucine rich repeat N-terminal domain 36 78 IPR013210 -
Accr1g00964 641 Pfam Leucine rich repeat 132 191 IPR001611 GO:0005515
Accr1g00964 641 Gene3D Transferase(Phosphotransferase) domain 1 420 630 - -
Accr1g00964 641 CDD TM_EGFR-like 253 282 - -
Accr1g00964 641 SUPERFAMILY L domain-like 38 241 - -
Accr1g00964 641 Gene3D Phosphorylase Kinase; domain 1 303 419 - -
Accr1g00964 641 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 24 614 IPR046959 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00964 Accr-Chr1 24143857 24147018 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00964 1 632 Receptor kinase-like Gene Family AT5G35390 48.645 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Accr1g00964 Pkinase 5.5e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00964 - - pcin:129292199 989.564