Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00952 ATGCCTTCAGATTTGGATGAGTGCCGGGAGCACCTGCTAGTGGTAGATGTGAATGATCAGAATAAGATCGACAAGTCTTCCAAATTTCAGATTCGAAATCTCACCAAAGTCTCTAATGCCGGAGTTCCGATTCTCAAGGGCATCGACTTAGACGTCCCCGAGGGCATGATACTCGGCGTTGTTGGACCCAGCGGTAGCGGCAAATCGACACTTCTCAGGGCCCTGAACCGCCTCTGGGAGCCTCCCTTTGGTACCGTCTTTCTCGATCATAACGATATCTGCGACCTTGATGTTCTCTCCCTCCGCCGTAAGGTCGGCATGCTCTTTCAGCTCCCTGCCCTCTTCGAAGGCACGGTAGCAGACAATGTGAGATATGGACCACAACTAAGAGGGAAGAAGCTGACAGATGAAGAAGTACGCAAGTTGCTGATAACAGCAGACCTTGATGCTTCTTTCATGAACAAGAAGGGCTCTGAACTCTCTGTGGGTCAAGCTCAACGTGTGGCACTTGCCAGGACATTAGCCAATTCCCCAGAGGTTTTACTGCTGGATGAGCCAACCAGTGCGCTAGATCCAATATCGACTGAGAACATAGAAGATGCTCTAGTGAAGCTGAACAAGAACAGTGGTATGACTGTGATAATTGTGTCTCACAGCATCAAACAGATACAGAGGATAGCTGACTTGGTTTGCCTACTTGTTGATGGTCAAATTGTTGAAGTTCTAAAGCCTCATCAGCTGTCTCAAGCCACGCATCCCATGGCCCAAAGGTTTCTTCAAATTAGTTCCTAG 792 0.4861 MPSDLDECREHLLVVDVNDQNKIDKSSKFQIRNLTKVSNAGVPILKGIDLDVPEGMILGVVGPSGSGKSTLLRALNRLWEPPFGTVFLDHNDICDLDVLSLRRKVGMLFQLPALFEGTVADNVRYGPQLRGKKLTDEEVRKLLITADLDASFMNKKGSELSVGQAQRVALARTLANSPEVLLLDEPTSALDPISTENIEDALVKLNKNSGMTVIIVSHSIKQIQRIADLVCLLVDGQIVEVLKPHQLSQATHPMAQRFLQISS 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00952 263 Pfam ABC transporter 45 188 IPR003439 GO:0005524
Accr1g00952 263 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 250 IPR027417 -
Accr1g00952 263 Gene3D - 24 262 IPR027417 -
Accr1g00952 263 FunFam ABC transporter, ATP-binding protein 26 258 - -
Accr1g00952 263 ProSitePatterns ABC transporters family signature. 160 174 IPR017871 GO:0005524|GO:0016887
Accr1g00952 263 PANTHER ABC TRANSPORTER I FAMILY MEMBER 17 3 262 IPR005670 GO:0005315|GO:0016020|GO:0035435
Accr1g00952 263 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 29 260 IPR003439 GO:0005524
Accr1g00952 263 CDD ABC_PstB_phosphate_transporter 29 247 IPR005670 GO:0005315|GO:0016020|GO:0035435
Accr1g00952 263 SMART AAA_5 54 244 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00952 Accr-Chr1 23355672 23359275 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00952 42 252 Calmodulin-binding Proteins AT2G36910 31.780 2.67e-30 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00952 K02068 - cave:132184583 403.675