Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00923 ATGTTAATATCAAAGAGACTCTTCACCTTCCTCTTGCTCTTTCTTCGCCTTTCAATTTTAGCTCATGCACAGCAACAGAGAGGTTTCGTAAGCATTGATTGTGGTGCTCCAGAGAATTTTGAATATACAGATGGTAACATTAAGTACAGCTCAGATGGAACTTATATTAACACAGGGGTCAACAGAAATATTTCCTCTGAATATAACTACCCAAAGAATCCAACTCTGCCACAACCACTTTCAGATCTCAGAAGTTTTCCAGAGGGTAAGAGAAATTGTTACAGTATAAAAACTCCAATAAGAAACAGTTTGCATTTGATAAGGGCTTCTTTCTTGTATGGGAACTATGATGGAGAAAACAAGCTTCCAGAATTTGATCTCTATGTGGATGTCAATTTCTGGTCCTCAGTAACATTCAGAAATGCTTCAGTGCAACTCCTAATGGAAATCATCAGCTTGAAAGTATCAGAAGAGATCAATGTCTGTCTTGTGAACAAAGGATTGGGAATTCCTTTCATCTCAGCATTGGAACTAAGACCAATTATTTATGGCCCTGTTTATGCTACTAAATCATCTGCTTCACTTTTACTCTTCAAAAGATGGGACATTGCATCTGTCAATGGAAGTGGGAGATATGAAGATGATGTTTATGATAGAATTTGGTCTCCTTACAGTTCATCTTCTTGGGAGATTTTGGAAACTTCTTCAGCCATCAATGATGATAAAAATGGCTATAAAGCGCCATTTGAAGTCATAAGGACTGCCGCTAGACCTAAGAATGAGAGTGCTGCTTTGGAATTCTCCTGGGAATCGAATGATCCGAACTTTAAATTTTATGTGTATTTGTACTTTGCTGAAGTTGAGAAGCTTCAGAAGAAGCAACGGAGGAAATTCAATATATCCTGGAATGGATCTCCATTATTTGGCCCCTTTTCCCCTCTTTACTTACAAGCAACCACTGTGTCGAATTCGAAATCCTTAGTGGGAAATAAACATCAAATTTCAATTTCTAGAACTGCAGACTCAACCTTACCACCCATCCTCAACGCAGTTGAAATTTATGTGGTAAGAGAGCTAGATGCAATACCAACATTTGAACAAGATGTTGATGCTATCATGAATATCAAAGTAACGTATGGTATTCAAAGAAATTGGGTAGGTGATCCTTGTGAGCCAAAGGACTATATTTGGGATGGCTTGGGATGTAACTACAGTAACTCGCCTCCGCTAATTATATCACTGAATTTGAGCTCAAGCAGTTTGAGTGGGGCAATAGCTCCTGCAATATCCAATCTCTTGTTACTAAAATCATTGGATTTATCAAACAATAGCTTAACTGGACCAATACCTCAGTTTATGGAAGACTTCAAATCCCTTAAAGTTCTGAACTTGAAAGGCAATCATCTGTCAGGTTTTGTCCCTGATAATCTTCTAGAAAGATCAAGAGCTGGATTAGTTTCACTGAGTGTAGATGATCAAAATATCTGTGGCTCAAGTACGTGCAAGAAAAAGAATATTGCTGTTCCCATAGCTGTTTCTATATCGTCAGTTCTGGTTCTATTGATTGCACTTGCTCTTGTCAGGAAATTGAGAAGGAAAAAAGCATCAGATAAGGAGATAGAAAAGGCAAACAAAGGTGGCGGAACTATAGCATCCAAAAAGTGGCAATATAGCTATGAGGAGATTTTAGAAATCACCAAAAACTTTGAAGTGGTAATTGGAAAAGGAGGATTCGGAATAGTGTACCGTGGTGAGTTGAAAGATAGGAACCAAGTTGCAGTGAAAATGCTTTCTCCATCATCATCTCAGGGGCCAAGGCAATTCCAAACGGAGGCTGAGCTGTTGATGACAGTTCATCACAGAAACTTGGTATCCTTCATTGGTTATTGTGATGATGACAATAAGATGGCACTCATTTATGAGTACATGGCCAATGGCAACCTGAAAAATTATCTCTCAGATAAAAACTCAAATATCTTGACGTGGCAAAAAAGACTTGAGATAGCAATTGATGCCGGACAAGGATTGGAATATCTACACCATGGATGCAAGCCACCTATAATACACAGAGATGTGAAGACAGCCAACATTCTGTTGAATGAAAACTTGGAAGCTAAGATAGCCGATTTTGGCCTCTCCAAGGTGTTTAAGAATGATAACACTAATTCAGAGTCTGAAGTCATGGGAACCACAGGCTACCTTGACCCACTATACTACAAGTCAAGAAAGTTGAATGAGAAAAGTGACATTTATAGTTTTGGAATAGTTATATTAGAGCTAATAACCGGTCAACCAGCGGTGATAAAAGGTGAAGAATCGGAACACATAACTGCGTGGGTAACAGATGAACTTAAAAGAGGGGATTTTAGCAGAATTGTAGATCCAAGACTTGAAGGCAAATTCAGTGCAAGTTCAATGGAAAAAGCTTTAGGAATAGCAGTGGCATGTTGTGCATCACCCTCCACTCACAGACCTTCCTTGAATTTTGTGGTGCAAGAGCTGAAACATTGTTTGGAAGTGGAGTTTCCTTCTCACTGTGACAGATTTGAGATGGTACCAAGGCAGGTTTATAAAGAGATGTATAGTTCGTCTGAGCCTTATTCTTATGATACTGATTCTTTCACTTCTCCTTTTGCTGGATAG 2643 0.3878 MLISKRLFTFLLLFLRLSILAHAQQQRGFVSIDCGAPENFEYTDGNIKYSSDGTYINTGVNRNISSEYNYPKNPTLPQPLSDLRSFPEGKRNCYSIKTPIRNSLHLIRASFLYGNYDGENKLPEFDLYVDVNFWSSVTFRNASVQLLMEIISLKVSEEINVCLVNKGLGIPFISALELRPIIYGPVYATKSSASLLLFKRWDIASVNGSGRYEDDVYDRIWSPYSSSSWEILETSSAINDDKNGYKAPFEVIRTAARPKNESAALEFSWESNDPNFKFYVYLYFAEVEKLQKKQRRKFNISWNGSPLFGPFSPLYLQATTVSNSKSLVGNKHQISISRTADSTLPPILNAVEIYVVRELDAIPTFEQDVDAIMNIKVTYGIQRNWVGDPCEPKDYIWDGLGCNYSNSPPLIISLNLSSSSLSGAIAPAISNLLLLKSLDLSNNSLTGPIPQFMEDFKSLKVLNLKGNHLSGFVPDNLLERSRAGLVSLSVDDQNICGSSTCKKKNIAVPIAVSISSVLVLLIALALVRKLRRKKASDKEIEKANKGGGTIASKKWQYSYEEILEITKNFEVVIGKGGFGIVYRGELKDRNQVAVKMLSPSSSQGPRQFQTEAELLMTVHHRNLVSFIGYCDDDNKMALIYEYMANGNLKNYLSDKNSNILTWQKRLEIAIDAGQGLEYLHHGCKPPIIHRDVKTANILLNENLEAKIADFGLSKVFKNDNTNSESEVMGTTGYLDPLYYKSRKLNEKSDIYSFGIVILELITGQPAVIKGEESEHITAWVTDELKRGDFSRIVDPRLEGKFSASSMEKALGIAVACCASPSTHRPSLNFVVQELKHCLEVEFPSHCDRFEMVPRQVYKEMYSSSEPYSYDTDSFTSPFAG 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00923 880 FunFam Leucine-rich repeat receptor-like protein kinase 542 642 - -
Accr1g00923 880 Pfam Protein tyrosine and serine/threonine kinase 570 833 IPR001245 GO:0004672|GO:0006468
Accr1g00923 880 Gene3D Ribonuclease Inhibitor 369 484 IPR032675 -
Accr1g00923 880 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 643 845 - -
Accr1g00923 880 Pfam Leucine Rich Repeat 435 451 IPR001611 GO:0005515
Accr1g00923 880 SUPERFAMILY Protein kinase-like (PK-like) 555 869 IPR011009 -
Accr1g00923 880 CDD STKc_IRAK 573 835 - -
Accr1g00923 880 ProSiteProfiles Protein kinase domain profile. 567 839 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00923 880 SUPERFAMILY L domain-like 395 497 - -
Accr1g00923 880 Gene3D - 203 356 - -
Accr1g00923 880 FunFam Leucine-rich repeat receptor-like kinase 367 498 - -
Accr1g00923 880 ProSitePatterns Protein kinases ATP-binding region signature. 573 595 IPR017441 GO:0005524
Accr1g00923 880 ProSitePatterns Serine/Threonine protein kinases active-site signature. 687 699 IPR008271 GO:0004672|GO:0006468
Accr1g00923 880 Pfam Malectin-like domain 32 355 IPR024788 -
Accr1g00923 880 Gene3D Phosphorylase Kinase; domain 1 540 642 - -
Accr1g00923 880 PANTHER OS07G0107800 PROTEIN-RELATED 30 838 - -
Accr1g00923 880 Gene3D Transferase(Phosphotransferase) domain 1 643 850 - -
Accr1g00923 880 SMART serkin_6 567 838 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00923 Accr-Chr1 22312875 22317168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00923 10 865 Receptor kinase-like Gene Family AT4G29180 52.494 0.0 882
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Accr1g00923 Malectin_like 8e-105 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00923 - - pcin:129292167 1362.44