Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00918 ATGGATGACTATCAAGAGATGGAGAGATTTGGTATGGATAATGATTTTGAAGGTGGTGAATGGATTGATGGTGAGTTCTACTATCGGAAGCGCAAAGAAAAACGTACCCAGACCAGAGAGGATGTTCTTTATGGGGTGTTTGCAGACTCTGATGATGATGAAGACGATTATTCAAACAGAAAACGCAGAAAAGATCGTGACTTATCTAAGAAGCCTGACCTCACAAAGCCTGTGAATTTTGTCTCTACTGGATCTTTTATGCCTAATCAAGATGATAACCATTCTAAAGAACAGATTGAAGAAGAAAATTATGCTCGTGATGATAAACCAGGTTTAGGTCTTGGCATGGGAACCGCTAGCACTTCTGGTTCTGGGTTAGGTTTTAATACCAGTCATCGTGAAAATGCTTCTGATGATGATAATGATGATGACGGTTTTCTGCCTACAGCATTTGGGAAGAAGATTAGGGAGGGAGCAATGAGAAGGGAGAAGGAAAAGGAGAGAGCAAAATTGGAAAAGAGGAGAGCTCAAGGAAAAACTCAAGCTCAAGATGGATTTTTAGATGTTGGGAAGTTTGAGAAGCATACAAAGGGGATCGGAATGAAGTTGTTGGAGAAGATGGGCTATAAAGGAGGTGGTCTTGGGAAGAATGAACAAGGTATTGTAGCTCCTGTTGAGGCTCATTTGAGGGCCAAGAATACAGGCATTGGATTTAATGACTCGAAGGCAACAATTCCTTTGCCAAGTGTGCAAGTTGAGAAGACGACATTGCTAGGAGTTACTCAACCTACAGCTGTTAGAGCAAAGGAAAGGTTATGGTCAAAGCAATCAAGGTCAAAGAAGAAGAAAGAGGAGGATCATTATACTACTGCTGAAGAATTGTTATCAAGCAATCAAGAACAAGGTCTAGAGCTTGTTCAGAAGGTTTTTGATATGAGAGGGCCACAGGTTCGAGTAATTACAAATTTGTCTGATTTGAATGCTGAGGAGAAGGCTAAGGAAAATGACGTCCCAATGCCAGAGCTTCAGCATAACATGGGGTTAATTGTTAGGTTGACTGAAGCAGACATCCAAGAGATTGATAGAAATTTGAGGAGGGAGAGGGAGACAGCACTTAGCTTGAAAAAAGAAAAAGATAAGTTAGAAACTGAGGTAGCACGTCAAAAGAAGCAGTTGGAAGATATGGAGGAAATAACAAGTGTGCTGGACCGAGTTGGAGAAGAGAACTCAATGGGGACATTGACATTGGATTTGCTTGCACAGTGCTTTACTGACCTGCGGAAAAGATATGCTGATAACTACAAGTTGTGTAACTTGTCTTGCATTGCTTGCTCATATGCTTTGCCTTTGTTTATTAGAGTATTCCAAGGATGGGATCCTCTTCAAAATCCATTACATGGGTTAGAGTTGGTATCACTGTGGAAAGCATTGCTTCAAGAAGAAGATTGCCTTGATATCTGGGATGTAACATCGCCTTATACTCAATTGATTTCTGAAGTTGTATTACCAGCTGTCAGGATTTCAGGTATCAATACCTGGCAGGCACGGGATCCTGAGCCAATGTTACGGTTTTTGGAGTCATGGGAAAAGTTGCTTCCTTCTTCAGTTCTCACAGCCATGTTGGACAATATAGTCATGCCAAAATTGTCAAGTGCTGTAGATACATGGGAACCGCATCGTGAGACTATTCCTATCCATACTTGGGTGCACCCATGGTTGCCTTTGTTGGGACACAAATTAGAGGGCATGTATCAGATGATACGCTTCAAATTGAGTACTGTTCTTGGTGCCTGGCACCCAAGCGATGGCTCTGCTTATGCTATATTGTCACCTTGGAAGAGTGTATTTGATTCAGTGAGTTGGGAACAACTCATGCTTCGATTTATTGTGCCAAAGTTGCAGCTTGTATTGCAAGAGTTCCAAGTGAACCCAGCAGATCAGAAACTTGATCCATTTTATTGGGTGATGAATTGGGCTTCTGCTGTTCCAATTCACCTGATGGTTGATATAATGGAAAAGTTCTTCTTCACCAAGTGGCTTCAGGTTTTGTATCATTGGTTGTGCTCAAACCCGAACTTTGAAGAAGTTACAAAATGGTATTTGGGCTGGAAAGAACTTATTCCAAAGGAACTTTTGGCTAATGAAAGTATCCGATATCAGTTAAATTGTGGTCTTGATATGATGAACCAGGCTGTTGAAGGTATGGAGGTAGTCCAACCTGGCTTGAAAGAAAATATCAGCTATCTTAGGGTACTTGAGCAAAGGCAGTTTGAGGCTCAGCAGAAAGCCGCAGCTCATGCTCAAACCCAAGCTCCTCCAGGCTTAGGGGGTGCTGCCCATATGGATGGGGCAGCAGGTGTACATGAGTTGAGCTTAAAGGAAGTCATTGAAGCCCATGCCCAACAACATGGTTTGCTATTCAAGCTTAAACCTGGCAGAATGCACAATGGTCATCAAATATATGGGTTTGGTAATGTCAATATTATAATAGATTCTCTAAATCAAAAGGTATATGCCCAAGCCGAGGATGCATGGTCTTTGGAATCTCTCCAAGGCTTACTGGAGCTGCATAATAAATCGCTTGGTCGGAGACGATGA 2598 0.4196 MDDYQEMERFGMDNDFEGGEWIDGEFYYRKRKEKRTQTREDVLYGVFADSDDDEDDYSNRKRRKDRDLSKKPDLTKPVNFVSTGSFMPNQDDNHSKEQIEEENYARDDKPGLGLGMGTASTSGSGLGFNTSHRENASDDDNDDDGFLPTAFGKKIREGAMRREKEKERAKLEKRRAQGKTQAQDGFLDVGKFEKHTKGIGMKLLEKMGYKGGGLGKNEQGIVAPVEAHLRAKNTGIGFNDSKATIPLPSVQVEKTTLLGVTQPTAVRAKERLWSKQSRSKKKKEEDHYTTAEELLSSNQEQGLELVQKVFDMRGPQVRVITNLSDLNAEEKAKENDVPMPELQHNMGLIVRLTEADIQEIDRNLRRERETALSLKKEKDKLETEVARQKKQLEDMEEITSVLDRVGEENSMGTLTLDLLAQCFTDLRKRYADNYKLCNLSCIACSYALPLFIRVFQGWDPLQNPLHGLELVSLWKALLQEEDCLDIWDVTSPYTQLISEVVLPAVRISGINTWQARDPEPMLRFLESWEKLLPSSVLTAMLDNIVMPKLSSAVDTWEPHRETIPIHTWVHPWLPLLGHKLEGMYQMIRFKLSTVLGAWHPSDGSAYAILSPWKSVFDSVSWEQLMLRFIVPKLQLVLQEFQVNPADQKLDPFYWVMNWASAVPIHLMVDIMEKFFFTKWLQVLYHWLCSNPNFEEVTKWYLGWKELIPKELLANESIRYQLNCGLDMMNQAVEGMEVVQPGLKENISYLRVLEQRQFEAQQKAAAHAQTQAPPGLGGAAHMDGAAGVHELSLKEVIEAHAQQHGLLFKLKPGRMHNGHQIYGFGNVNIIIDSLNQKVYAQAEDAWSLESLQGLLELHNKSLGRRR 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00918 865 MobiDBLite consensus disorder prediction 33 182 - -
Accr1g00918 865 Pfam G-patch domain 196 237 IPR000467 GO:0003676
Accr1g00918 865 Pfam GC-rich sequence DNA-binding factor-like protein 417 683 IPR022783 -
Accr1g00918 865 PANTHER TUFTELIN-INTERACTING PROTEIN 11-RELATED 1 852 IPR045211 GO:0000390
Accr1g00918 865 MobiDBLite consensus disorder prediction 54 73 - -
Accr1g00918 865 Coils Coil 350 398 - -
Accr1g00918 865 SMART G-patch_5 194 239 IPR000467 GO:0003676
Accr1g00918 865 Coils Coil 159 181 - -
Accr1g00918 865 MobiDBLite consensus disorder prediction 93 108 - -
Accr1g00918 865 ProSiteProfiles G-patch domain profile. 196 241 IPR000467 GO:0003676
Accr1g00918 865 PIRSF TFIP11 1 860 IPR024933 -
Accr1g00918 865 MobiDBLite consensus disorder prediction 76 92 - -
Accr1g00918 865 MobiDBLite consensus disorder prediction 146 179 - -
Accr1g00918 865 MobiDBLite consensus disorder prediction 117 132 - -
Accr1g00918 865 Pfam Tuftelin interacting protein N terminal 2 104 IPR022159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00918 Accr-Chr1 21944774 21947371 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00918 196 237 C2H2 Transcription Factor Family AT5G26610 47.619 3.27e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00918 K13103 - gmx:100783256 1366.67