Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00906 ATGGAGAAGACCTTTCTTCTCTCTTTTCTCTTCCTTCTCTTCCATTTAGCTCCAGCAAAAGCTGATCTTGGTGTTGGCATAGGTATCGGTATCGGTATCGGCATTGGCAATGGGGGCGGAGGCGGTGGTGGGGCTAATAATAGCCCAGGACCGTCTGGACCTTCAGTGTCAAAGATGGACATGGCTTACAAAAGTCTCCAAGCATGGAAATCAGCCATCACTGACGACCCATTAAAGATTCTTGATAATTGGACAGGTTCCAATGTTTGTTTTTATAATGGAGTCTTTTGTTCCAATTCTTTTGTTGCTGGAATTGATCTCAACCACGCAAATCTTCAAGGAACTCTCGTTAAAGACCTATCTTTGCTCACTGATTTGTCTCTTCTTCACCTTAACAGCAACAGATTCACTGGTACAATTCCTGACACATTCAAAGACCTTTCCTCTCTAAAAGAATTAGACCTCAGTAACAACCAGTTTTCTGGTGAATTCCCCACAGTAGTTTTGAACATCCCAAATCTCATTTACTTAGACCTCAGATTCAACTCCTTCTCTGGGACCCTCCCAGATGAACTTTTTCGTAAAAATCTTGACGCGATACTTCTCAACAATAACCAATTCCAAGGCCAAATCCCTCAGAATCTAGCTAGTTCCTCAGCTTCTGTCATCAACCTAGCTAACAATAAGTTCACTGGAACCATCCCAATTTCAAGTTTAGGTTTGGTGGGTACTTATAATTCTAAGCTGAAGGAGATTCTGTTCTTAAATAACCAGTTAACAGGTTGTATTCCTCAAGGAGTGGGATTGTTCAGAGATGTGCAAGTTCTTGATGTGAGCTTTAATTCATTGGTGGGTCATTTACCAGGAACACTATCTTGTTTGGAAGATATAGAAGTTCTTAACTTGGCACATAACCAGCTTTCTGGGGAATTATCTGATGTAGTGTGCTCGTTGAAGAGTTTGGTGAATTTAACTGTGGCTTATAATTTTTTCAATGGGTTGAGTCAGGAATGTTCTAGGCTTTTGATTAGGAATGTGGGGTTTGATTTCTCGGATAATTGTATTCCTGGGAGGGACATGCAGAGACCTAAACCAGAATGTTCTGTCATCCCAGGTGGCAGCTTAAGTTGTCTCAGAATTCCCATACCAAAGCCTCTTGATTGTGCTTCATTGGCAATAGCTTCATCTTCCCCTTGA 1197 0.4144 MEKTFLLSFLFLLFHLAPAKADLGVGIGIGIGIGIGNGGGGGGGANNSPGPSGPSVSKMDMAYKSLQAWKSAITDDPLKILDNWTGSNVCFYNGVFCSNSFVAGIDLNHANLQGTLVKDLSLLTDLSLLHLNSNRFTGTIPDTFKDLSSLKELDLSNNQFSGEFPTVVLNIPNLIYLDLRFNSFSGTLPDELFRKNLDAILLNNNQFQGQIPQNLASSSASVINLANNKFTGTIPISSLGLVGTYNSKLKEILFLNNQLTGCIPQGVGLFRDVQVLDVSFNSLVGHLPGTLSCLEDIEVLNLAHNQLSGELSDVVCSLKSLVNLTVAYNFFNGLSQECSRLLIRNVGFDFSDNCIPGRDMQRPKPECSVIPGGSLSCLRIPIPKPLDCASLAIASSSP 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00906 398 Gene3D Ribonuclease Inhibitor 61 170 IPR032675 -
Accr1g00906 398 Pfam Leucine rich repeat 126 183 IPR001611 GO:0005515
Accr1g00906 398 Gene3D Ribonuclease Inhibitor 244 371 IPR032675 -
Accr1g00906 398 Gene3D Ribonuclease Inhibitor 171 240 IPR032675 -
Accr1g00906 398 FunFam Leucine-rich repeat extensin-like protein 1 63 217 - -
Accr1g00906 398 SUPERFAMILY L domain-like 69 355 - -
Accr1g00906 398 PRINTS Leucine-rich repeat signature 150 163 - -
Accr1g00906 398 PRINTS Leucine-rich repeat signature 294 307 - -
Accr1g00906 398 Pfam Leucine rich repeat N-terminal domain 64 98 IPR013210 -
Accr1g00906 398 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 56 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00906 Accr-Chr1 20619964 20621160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00906 58 379 Leucine-rich Repeat extension Gene Families AT3G24480 51.343 4.54e-106 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00906 - - jcu:105637819 505.368