Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00902 ATGTCGTGGCAAACCTACCTCGATGAGCACCTCATGTACCAGGTCGAAGGTAAGCATCTCAATTCTGCTGCTATCGTTGGTCAAGATGGCAGCGTTTGGGCTCAGAGCGCCACTTTCCCTCAGCTCAAGCCTGAGGAAATCACTGCTATCATGAATGACTTTGCCGAACCTGGATCACTTGCTCCTAATGGATTATATCTTGGTGGCACTAAATATATGGTGATTGAAGGTGAACCAGGATTGCTCATTAGAGGGATGAAGGTGTATGATAATTTCTGTGGTTTCCATTATCGCCATCTTCTCAGCCTTTTCCTCCATTGTAGCCTGGGTGCTGGCGGGGTTACTATCAAGAAGACCACCCAAGCCCTAGTCATTGGAATTTATGAAGAACCAATGGCTCCTGGTCACTGCGACAAGATAGTGAAAAGAGTTGGTGCTGACCTCATTGACCATGGTCTTTAA 462 0.4675 MSWQTYLDEHLMYQVEGKHLNSAAIVGQDGSVWAQSATFPQLKPEEITAIMNDFAEPGSLAPNGLYLGGTKYMVIEGEPGLLIRGMKVYDNFCGFHYRHLLSLFLHCSLGAGGVTIKKTTQALVIGIYEEPMAPGHCDKIVKRVGADLIDHGL 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00902 153 SUPERFAMILY Profilin (actin-binding protein) 2 152 IPR036140 -
Accr1g00902 153 Pfam Profilin 1 152 IPR005455 GO:0003779
Accr1g00902 153 CDD PROF 2 152 IPR005455 GO:0003779
Accr1g00902 153 PRINTS Profilin signature 40 60 IPR005455 GO:0003779
Accr1g00902 153 PRINTS Profilin signature 3 12 IPR005455 GO:0003779
Accr1g00902 153 PRINTS Profilin signature 64 78 IPR005455 GO:0003779
Accr1g00902 153 PRINTS Profilin signature 21 30 IPR005455 GO:0003779
Accr1g00902 153 ProSitePatterns Profilin signature. 1 8 IPR027310 GO:0003779
Accr1g00902 153 Gene3D Dynein light chain 2a, cytoplasmic 1 153 - -
Accr1g00902 153 PRINTS Plant profilin signature 1 12 IPR005455 GO:0003779
Accr1g00902 153 PRINTS Plant profilin signature 71 80 IPR005455 GO:0003779
Accr1g00902 153 PRINTS Plant profilin signature 52 66 IPR005455 GO:0003779
Accr1g00902 153 PRINTS Plant profilin signature 27 40 IPR005455 GO:0003779
Accr1g00902 153 SMART prof_2 1 153 IPR005455 GO:0003779
Accr1g00902 153 PANTHER PROFILIN 1 152 IPR005455 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00902 Accr-Chr1 20477504 20478590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00902 1 153 Cytoskeleton Gene Families AT4G29350 57.516 1.92e-56 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00902 K05759 - aew:130765836 205.682