Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00894 ATGTCAAATTCTCATTCTATTTGCTTCCTTCTTGTTCTTCTTTTCCTTCTGCAGAATCCTTCTGCAACATTGTGCCACACCAAAGGACTCAGACCCGGCCGGCATTATTCGGGTCTTGGGTTATCTATCAACAGGACCCAAATCCAGAATTCGGAGCAGCAATTCATGAGATGGGTTGATTTTGTTGGTAGCCTCAAGCACTCTGTGTTTAAGACTGCAAAAAACAAGCTTTTTCCTTCTTACACTCTTCACGTCTCTAAGAATCCTGCGGTAGCAGATTTTGCAACTATTCAAGAAGCCATTGATTCTCTTCCTTCCATCAATCTCGTGAGAGTGATCATTAAGGTTCATGCTGGTGTTTACACTGAGAAAGTGAACATTCCTCCTATGAAATCCTTCATAACCATAGAAGGAGCAGGAGCAGATAACACTATAGTTCAGTGGGGTGACACAGCAAAAACACCTGGTCCCAGAGGGCAGCCTTTAGGAACATATGGTTCTGCAACATTTGGAGTGAACTCACCTTATTTCATAGCCAAGAACATAACATTCAAAAACACAACCCCAGTTCCTGCACCAGGAGCAGTAGGGAAGCAAGCAGTGGCATTCAGAATATCAGCAGACACAGCATCATTCTACGGATGTAAATTCCTAGGAGCACAAGACACATTGTATGACCATCTGGGTAGACATTATTACAAGGATTGTTACATTGAAGGCTCAGTTGATTTCATATTCGGGAACGCCCTATCTCTCTTTGAGGGATGTCACGTGCATGCAATAGCACAGAACATAGGGGCCTTAACAGCACAAGGAAGGAGCAGCATGTTGGAGGACACAGGGTTCTCATTTGTGCACTGTAAGGTCACGGGTTCAGGAGCACTTTACCTGGGAAGGGCCTGGGGTCCTTTTTCTCGTGTGGTATTTGCTTACACTTACATGGACGACATCATCATTCCCAAGGGCTGGTACAATTGGGGTGACCCTAATCGTGAAATGACAGTATTTTATGGACAGTACCAGTGTACAGGACCTGGGGCTAGCTTTGCTGGCAGAGTATCATGGTGTAGAGAACTCAGCGACGAGGAAGCTCAGCCTTTTATTTCCCTTAGCTTCATTGATGGCGATGAGTGGACTAAATTGTAA 1146 0.4476 MSNSHSICFLLVLLFLLQNPSATLCHTKGLRPGRHYSGLGLSINRTQIQNSEQQFMRWVDFVGSLKHSVFKTAKNKLFPSYTLHVSKNPAVADFATIQEAIDSLPSINLVRVIIKVHAGVYTEKVNIPPMKSFITIEGAGADNTIVQWGDTAKTPGPRGQPLGTYGSATFGVNSPYFIAKNITFKNTTPVPAPGAVGKQAVAFRISADTASFYGCKFLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNALSLFEGCHVHAIAQNIGALTAQGRSSMLEDTGFSFVHCKVTGSGALYLGRAWGPFSRVVFAYTYMDDIIIPKGWYNWGDPNREMTVFYGQYQCTGPGASFAGRVSWCRELSDEEAQPFISLSFIDGDEWTKL 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00894 381 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 74 379 - -
Accr1g00894 381 ProSitePatterns Pectinesterase signature 2. 238 247 IPR033131 -
Accr1g00894 381 FunFam Pectinesterase 79 381 - -
Accr1g00894 381 Pfam Pectinesterase 92 376 IPR000070 GO:0030599|GO:0042545
Accr1g00894 381 Gene3D - 79 381 IPR012334 -
Accr1g00894 381 SUPERFAMILY Pectin lyase-like 78 380 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00894 Accr-Chr1 20121339 20126161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00894 92 378 Carbohydrate Esterase AT5G47500 51.042 6.81e-103 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00894 K01051 - qsa:O6P43_007857 662.144