Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00887 ATGACCCTCACAAACCTCAATCTCTCCTCCAATCTTTTCAAAGGGAAGATTCCTAGTGAATTTGGAAATCCCGTCTATTCTGATAGCTTTCTAAACAATTCTGGCCTCTCTGCGGATACCGAAAAGCTAAACCTTCCCTTGTGCAATTCCGGTTCTAACCTTCAAATTGAAAGGTTAAGAAAGAGATCATCTGCATCTCTTCCTTTGATAATAGTTCTAGTGATTGTGGCCTTCTTAGCAGCTTTCTTGGTTTTACACTTGATTGTTAGATTATACAAATCAAGAAAGCAAGAATTGGATAATTCATGGAAGTTGACTTCCTTCCAGAGGGTAAGTTTCTCAGAAATGAACATTGTGTCATCTTTGACAGATGATAATATTATAGGCAGAGGTGGGTATGGTACGGTACACCAAGTCCCCGTAGATGGTTTAGGCTACGTCGCTGTGAAGAAGATATTCAGTAACAAGATGTGGGAGCAGAAACTTGAGGATGCATTCCTAGCAGAAGTTAAGATTTTGAGCGACATTCGTCACAACAATATTGTGAAGCTGTTGTGTTGCATGTCAAATGATGATTCCATGCTTCTTGTGTATGAATATCTAGAAAACAACAGCCTTGATCGCTGGCTGATCAAGAAGAATAGGTTAAACCATAATTTTGTCCTCGATTGGCTGAAAAGATTGCAGATAGCCATTGGAGCGGCGCAAGGTCTGACCTATATGCACCATGATTGCCCACATCCCGTTGTTCACCGTGATATTAAAACAAGTAACATCCTTTTGGATTCTGAATTCAATGCAAAAGTTGCAGACTTTGGTCTAGCAAGAATATTGATCAAGCCAAGCGAACTCACCATGTCAGGTGTAGCTGGATCATTCGGCTATATTGCTCCAGAATATATTCAAACAACGAAAATCAACGAAAAGATCGATGTGTATAGTTTTGGAGTGGTGTTGCTGGAACTTACAACTGGGAAGGAAGCAAACCGTGGAGATGAACACTCGTCTCTTGCAGAATGGGCATGGCGGCATGTGCAGCTGGGCGGAGATGTAGAGGAAGTTCTTGACAAGGAAATTATGGAAGCATGCTATATGGATGAAATATGCTGCGTCTTCAAACTTGGGGTGATGTGTACTGCAATACTGCCAGCTAGTAGGCCTTCCATGAAGGAGGTTCTGCAAGCACTGCTTCGTTGCAGGGACCCGTACGGTTTTGGACAAAGGAGTCCTGGAGTCTTTGATTTTGTTCCCCTCCTGAAGAATTCCAAGAGGGAAAGTAGATTGGATATTGATGATGATTTATAG 1305 0.4192 MTLTNLNLSSNLFKGKIPSEFGNPVYSDSFLNNSGLSADTEKLNLPLCNSGSNLQIERLRKRSSASLPLIIVLVIVAFLAAFLVLHLIVRLYKSRKQELDNSWKLTSFQRVSFSEMNIVSSLTDDNIIGRGGYGTVHQVPVDGLGYVAVKKIFSNKMWEQKLEDAFLAEVKILSDIRHNNIVKLLCCMSNDDSMLLVYEYLENNSLDRWLIKKNRLNHNFVLDWLKRLQIAIGAAQGLTYMHHDCPHPVVHRDIKTSNILLDSEFNAKVADFGLARILIKPSELTMSGVAGSFGYIAPEYIQTTKINEKIDVYSFGVVLLELTTGKEANRGDEHSSLAEWAWRHVQLGGDVEEVLDKEIMEACYMDEICCVFKLGVMCTAILPASRPSMKEVLQALLRCRDPYGFGQRSPGVFDFVPLLKNSKRESRLDIDDDL 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00887 434 FunFam Kinase family with leucine-rich repeat domain-containing protein 201 409 - -
Accr1g00887 434 Pfam Protein kinase domain 124 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00887 434 Gene3D Transferase(Phosphotransferase) domain 1 201 404 - -
Accr1g00887 434 ProSitePatterns Protein kinases ATP-binding region signature. 128 151 IPR017441 GO:0005524
Accr1g00887 434 Gene3D Phosphorylase Kinase; domain 1 92 200 - -
Accr1g00887 434 SUPERFAMILY Protein kinase-like (PK-like) 113 397 IPR011009 -
Accr1g00887 434 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 3 398 - -
Accr1g00887 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Accr1g00887 434 ProSiteProfiles Protein kinase domain profile. 122 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00887 434 SMART serkin_6 122 403 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00887 Accr-Chr1 19904001 19905398 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00887 1 396 Receptor kinase-like Gene Family AT5G25930 53.431 2.18e-136 414
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr1g00887 Pkinase 1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00887 - - gmx:100798963 566.614