Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00881 ATGAGAAATCCAACTCCATTGTTCTTCTTCTTCTTCCTTCTCTTCCTGAGCTGTGTGAATTCTCAGTCTGAACTTTATGCTCAAGAACATGAAGTTTTGCTGAGGATGAAACAGTACTTTAACAACCCATCTTCTCTCAGTCACTGGACAAATTCATCATCTCATTGTTCATGGTCTCAGATAACCTGCACCAATAACTCTGTTACAGGGCTGGCTCTGATCAACATCAATATAAGCCAACCGATACCAACTTTCATCTGTGAGCTTAAGAATCTCAGTTCTATTGGTTTTCAATTGAATTACATTCCTCTGGGGTTCCCAACGTATCTCTACAAATGCTCCAAGCTGGAGTACTTGGACCTATCTACTAATTACTTTGTTGGTAAGGTTCCAGATGACATTGACCGATTGGCCGGCCTGCGTTTTCTTAACCTTGGCAGTAACAACTTCTTCGGTGAGATTCCGGTGAGTGTCACCAAGTTGAAAGAGCTCACAAGTCTTCAGCTTAATAGCTGTTACTTCAATGGCACTATCCCAAGTGAAATAGGCAACTTATCCAATCTTGAAGTCTTAAATTTGGGCTTAAACCTATTCTCACCTTCTCAGTTTCCCTCTAGCTTCATGAAGCTCACAAAATTGAAGGATTTTGTGATGTCTTCCTGCAACTTGACCGGTGAAATCCCCGAAAGCATCGGGCAACTGGCGGTCTTAGAGACATTGGATTTGTCCATGAATCAGTTAAGTGGCAAAATTCCAAGTAGTTTGTTTATGCTGAAGAATCTGAGCATTATGTTCCTTTCGAGGAATCAGCTTAACGGTGAGCTACCTCAAGTGATTGAAACTTTAAACTTGACCATCGTTGATCTTGCTCAGAACAAGCTCACAGGGAAGATACCAAATGGCTTTGGGAATCTCCAGAAGCTAACTGGTTTGAACTTTGGTATTAACCAATTATCAGGTGAGATTCCAGAAAGCTTAGGCCGTCTTCAATCTATAATAGACTTTAGTATCTTCTTCAACAATTTATCAGGCAGTATTCCTCCAGAGTTTGGGCTCCATTCAAATCTTAGAAGATTTGAGATTGCTTCGAACAATTTCACAGGTAGTCTTCCTCAGAACTTGTGTTACCATGGAAATTTATTTAGATTAACAGCTTATGAAAATAAACTCAGTGGAGAATTACCAGAGTCACTTGGAAATTGTAGCAGCTTGCTAGAGTTGAAAGTCTACAATAATGAACTCTCAGGTGAAATTCCTAGTAGCCTTTGGGCGTCTCAGAATTTGTCAACTTTTATGATCAATGACAATAATTTCACAGGTGAGCTTCCTGAAAAATTGCCTGTGAATGTTTCACTCATGACAATTAGTTACAATCAGTTTTCTGGTAGAATCCCAGCAGGAATATCTTCCATGAAGAATCTGGTTGTGTTTAATGCAAGTAGAAACCTCTTTAATGGAAGTATCCCACAAGAGCTAACCAGTCTTTCTCAGCTAGCAACTTTGTTGCTTGATCAGAACAAACTTTCTGGGCCACTTCCATCTAAGATTATATCATGGGAATCTCTGAGAACTCTAAACTTGAGCCAAAATCAACTCACCGGCGAAATCCCAGATTCGATTGGTCATTTACCTGACCTTGCTCAACTAGATTTGTCAGAAAATCAACTCTCTGGCCAAATTCCATCTCAACTAGGCCTACCCTCTGTTCTCAACCTTTCTTCTAATCATTTGACTGGGAAGATTCCCAGTGAATTTGATAATCTTGCTTATGCCACCAGCTTTTTGAACAATTCTGGACTTTGTGCTGATACAGATGGATTAAACCTCAAATTGTGCAATTCTGGTTCTGTCCCTGGAAGTTCAAGCAAAGGCTCATCTTTTTCTGTTGGGTTGATCATAGGCCTTGTTTTAGTAGCCTGCATAGCAGTTTTCTTGTCATCACTTTTGATGATGAAATTCTACCAAAGGAGAAATCAAGAACTGGACACTTCATGGAAGTTAACTTCCTTCCAAAAGCTCAGTTTCACAGAATCAAACATCGTCTCATCCATGACGGATTATAACATCATTGGCAGTGGAGGGTACGGTACAGTGTACCGTATCGCCATCAACGACGATGTGGGCTATGTTGCAGTGAAGAAGATAAGCAACAATAGGAAGTTGGATCAGAAACTCGAGAATGCATTTATTGCGGAAGTTAAAATCTTGGGCACAATTCGTCACATTAACATAGTGAAGTTGCTATGTTGCATGTCTAATGAGGATTCTCTGCTTCTTGTTTATGAGTATATGGAAAATCACAGTCTTGATAAGTGGCTACACAAGAAGATTAGTAATGGCCCTTCAAGTGACTTGTCATCTGCCACAGTTCATAGTGTTTTTCTTGATTGGCCAAAGAGAATGCAAATAGCCATTGGGATTGCACAAGGTTTGAGCTACATGCATCAAGACAGCTCACCGCCGATTATTCATCGCGATATCAAAGCAAGTAATATTCTTTTGGATTCTCAGTTCAATGCAAAAGTTGCCGATTTTGGTCTTGCAAGGATGTTGATCAAACAAGGAGAACAAGATACCATGTCAGCTGTTGTTGGCTCTTTTGGTTACATTGCTCCAGAATATGCTCAAACAAAAAGAGTGAACGAAAAGGTTGATGTATATGGCTTTGGAGTGATCCTGCTTGAGCTGACAACAGGAAAAGAAGCTAACTATGGAGATGAACACTCCTCTCTCGCAGAATGGGCATGGCGGCATATTCGATTAGGAAGCAACATAGAGCAAGTTCTAGACGAAGATGTTAAGGAAACATTTTACTTGTCGGAAATGTGCAGTGTCTTCAAGCTTGGGGTGATGTGTACAAGCAAAGATCCAGCTAGTAGACCTTCCATGAAAGAGGCTCTGAATATATTGCTGCGCTTGAGAGAACCGGTTGGTTATGTAGAAATGAATTTTGGTCATTTTGAGGTTGTTCCTCTACTAAAGAATTCTAAAAGGGAGAGTAGGTTGGACATTGATGATAATGATAGCTAA 3030 0.402 MRNPTPLFFFFFLLFLSCVNSQSELYAQEHEVLLRMKQYFNNPSSLSHWTNSSSHCSWSQITCTNNSVTGLALININISQPIPTFICELKNLSSIGFQLNYIPLGFPTYLYKCSKLEYLDLSTNYFVGKVPDDIDRLAGLRFLNLGSNNFFGEIPVSVTKLKELTSLQLNSCYFNGTIPSEIGNLSNLEVLNLGLNLFSPSQFPSSFMKLTKLKDFVMSSCNLTGEIPESIGQLAVLETLDLSMNQLSGKIPSSLFMLKNLSIMFLSRNQLNGELPQVIETLNLTIVDLAQNKLTGKIPNGFGNLQKLTGLNFGINQLSGEIPESLGRLQSIIDFSIFFNNLSGSIPPEFGLHSNLRRFEIASNNFTGSLPQNLCYHGNLFRLTAYENKLSGELPESLGNCSSLLELKVYNNELSGEIPSSLWASQNLSTFMINDNNFTGELPEKLPVNVSLMTISYNQFSGRIPAGISSMKNLVVFNASRNLFNGSIPQELTSLSQLATLLLDQNKLSGPLPSKIISWESLRTLNLSQNQLTGEIPDSIGHLPDLAQLDLSENQLSGQIPSQLGLPSVLNLSSNHLTGKIPSEFDNLAYATSFLNNSGLCADTDGLNLKLCNSGSVPGSSSKGSSFSVGLIIGLVLVACIAVFLSSLLMMKFYQRRNQELDTSWKLTSFQKLSFTESNIVSSMTDYNIIGSGGYGTVYRIAINDDVGYVAVKKISNNRKLDQKLENAFIAEVKILGTIRHINIVKLLCCMSNEDSLLLVYEYMENHSLDKWLHKKISNGPSSDLSSATVHSVFLDWPKRMQIAIGIAQGLSYMHQDSSPPIIHRDIKASNILLDSQFNAKVADFGLARMLIKQGEQDTMSAVVGSFGYIAPEYAQTKRVNEKVDVYGFGVILLELTTGKEANYGDEHSSLAEWAWRHIRLGSNIEQVLDEDVKETFYLSEMCSVFKLGVMCTSKDPASRPSMKEALNILLRLREPVGYVEMNFGHFEVVPLLKNSKRESRLDIDDNDS 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00881 1009 Gene3D Ribonuclease Inhibitor 200 351 IPR032675 -
Accr1g00881 1009 PRINTS Leucine-rich repeat signature 543 556 - -
Accr1g00881 1009 PRINTS Leucine-rich repeat signature 237 250 - -
Accr1g00881 1009 Pfam Leucine Rich Repeat 569 588 IPR001611 GO:0005515
Accr1g00881 1009 Pfam Leucine Rich Repeat 283 305 IPR001611 GO:0005515
Accr1g00881 1009 SMART serkin_6 684 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00881 1009 ProSiteProfiles Leucine-rich repeat profile. 521 543 IPR001611 GO:0005515
Accr1g00881 1009 Pfam Protein kinase domain 686 968 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00881 1009 FunFam Receptor-like protein kinase HSL1 664 763 - -
Accr1g00881 1009 FunFam Kinase family with leucine-rich repeat domain-containing protein 764 982 - -
Accr1g00881 1009 ProSitePatterns Serine/Threonine protein kinases active-site signature. 822 834 IPR008271 GO:0004672|GO:0006468
Accr1g00881 1009 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 26 182 - -
Accr1g00881 1009 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 355 970 - -
Accr1g00881 1009 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 183 275 - -
Accr1g00881 1009 Gene3D Ribonuclease Inhibitor 352 616 IPR032675 -
Accr1g00881 1009 SUPERFAMILY Protein kinase-like (PK-like) 683 978 IPR011009 -
Accr1g00881 1009 ProSiteProfiles Protein kinase domain profile. 684 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00881 1009 Pfam Leucine rich repeat N-terminal domain 28 63 IPR013210 -
Accr1g00881 1009 SUPERFAMILY L domain-like 27 282 - -
Accr1g00881 1009 Gene3D Phosphorylase Kinase; domain 1 661 763 - -
Accr1g00881 1009 Pfam Leucine rich repeat 518 556 IPR001611 GO:0005515
Accr1g00881 1009 Gene3D Transferase(Phosphotransferase) domain 1 764 981 - -
Accr1g00881 1009 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 278 450 - -
Accr1g00881 1009 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Accr1g00881 1009 ProSitePatterns Protein kinases ATP-binding region signature. 690 714 IPR017441 GO:0005524
Accr1g00881 1009 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 451 616 - -
Accr1g00881 1009 Gene3D Ribonuclease Inhibitor 26 199 IPR032675 -
Accr1g00881 1009 SUPERFAMILY L domain-like 205 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00881 Accr-Chr1 19595322 19599216 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00881 29 1008 Receptor kinase-like Gene Family AT5G25930 49.087 0.0 911
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr1g00881 Pkinase 7e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00881 - - gmx:100798963 1256.51