Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00864 ATGGCTGAGCAACTTCTTAGCTCAGAGACTGGCAGTTCCACCAACTGCTCTTCTCCTTCTCCTTCTCCATCTTCGTCTTCTTCTTCGTCTTCGTCCTTGTCTTCTTCTTTTGCTCAAAAGAAGCAGCTCAAGCGAGCCAGAGAAGAAGATAGTAATAGCAAGCACCCGGTTTATAGAGGGGTCCGAAGGCGAACGTGGGGCAAATGGGTGTCTGAAATCCGTGAACCCAGGAAGAAAAATCGGATCTGGCTCGGCACTTTTGCCACTGCCGAGATGGCTGCTCGTGCCCACGATGTCGCTGCCCTTAGCATTAAAGGCACCTCCGCTATCCTCAACTTCCCTGAGCTCGCCGATTCCCTGCCCCGACCAGCCTCCAAATCGCCTCGAGATGTCCAGGCCGCCGCCACCAAAGCCGCTTCCATGCAGATACTCACCACCACCAACAATCTCATCCCCACATCCACAACCTCATCTTCGTCTTCTTCCTCTGCTGAAGAGGTTTCCACACCAGAGGAACTAGACGAGATAGTGGAGCTTCCATCACTGGGTACAAGCTTCCAAGAACCCGACCCGAATAACGAGTTTGTGTTCTTTGACCCGGTAGATGGGTGGTCCTATCCTCACCCGTGGTATCACAGTCTTTACGATGATGAGAACAATTACTATGGTGGTGGCTATTTCACTATGGATCGCACATCATCACTACATCATGAAGAAACAGAGGGTTTGATTCTTTGTGGCTTTGAAGGCTCGTTGTGGCAACATTAG 768 0.5104 MAEQLLSSETGSSTNCSSPSPSPSSSSSSSSSLSSSFAQKKQLKRAREEDSNSKHPVYRGVRRRTWGKWVSEIREPRKKNRIWLGTFATAEMAARAHDVAALSIKGTSAILNFPELADSLPRPASKSPRDVQAAATKAASMQILTTTNNLIPTSTTSSSSSSSAEEVSTPEELDEIVELPSLGTSFQEPDPNNEFVFFDPVDGWSYPHPWYHSLYDDENNYYGGGYFTMDRTSSLHHEETEGLILCGFEGSLWQH 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00864 255 PRINTS Ethylene responsive element binding protein signature 58 69 IPR001471 GO:0003700|GO:0006355
Accr1g00864 255 PRINTS Ethylene responsive element binding protein signature 80 96 IPR001471 GO:0003700|GO:0006355
Accr1g00864 255 CDD AP2 58 116 IPR001471 GO:0003700|GO:0006355
Accr1g00864 255 MobiDBLite consensus disorder prediction 146 167 - -
Accr1g00864 255 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 28 185 - -
Accr1g00864 255 MobiDBLite consensus disorder prediction 146 173 - -
Accr1g00864 255 SMART rav1_2 57 120 IPR001471 GO:0003700|GO:0006355
Accr1g00864 255 Pfam AP2 domain 56 106 IPR001471 GO:0003700|GO:0006355
Accr1g00864 255 ProSiteProfiles AP2/ERF domain profile. 57 114 IPR001471 GO:0003700|GO:0006355
Accr1g00864 255 MobiDBLite consensus disorder prediction 1 56 - -
Accr1g00864 255 MobiDBLite consensus disorder prediction 41 56 - -
Accr1g00864 255 Gene3D AP2/ERF domain 57 115 IPR036955 GO:0003700|GO:0006355
Accr1g00864 255 SUPERFAMILY DNA-binding domain 57 115 IPR016177 GO:0003677
Accr1g00864 255 MobiDBLite consensus disorder prediction 1 40 - -
Accr1g00864 255 FunFam Ethylene-responsive transcription factor 2 56 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00864 Accr-Chr1 18792427 18793194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00864 23 224 AP2-EREBP Transcription Factor Family AT5G11590 58.294 1.57e-65 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr1g00864 AP2 1.3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00864 K09286 - qsa:O6P43_003984 268.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g00864 1 18792427 18793194 Accr1g00864 1 18792427 18793194 ECH