Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00854 ATGGGAAGGAAAAAGTCAGAGGAAGCTGGCCCTGCCACAAAGGCTAAGAAGGAAAAGTTCTCCGTCTCTGCCTTGCTTGCCAGTATGGATGAAAAACCTGATAAACCCAAAAAAGGATCTTCTTCATCCAGTAAGCCCAAGGCAAAATCTGCTCCAAAAGTTTCTGCATATACTGACGGTATTGATCTTCCTCCCTCTGATGATGAAGATGAAGATATCATGAAAGAGGAGCAAGAACAAAATAGTGTGGCTAAGCGGTCCACTCAGCAGCAAAAGCCTGAGTTAAAGCCTCTTGATGTGGCTATCAGTGACAAAGAGTTAAAAAAGCGGGAAAGGAAGGATATTCTTGCTGCCCATGCTGCAGAGTTGGCTAAGCAGGAAGCACTCAAGGATGACCGTGATGCTTTTACTGTGGTCATTGGAAGCCGGACTTCAGTGCTTGATGGAGAAAATGATGCCGATGCCAATGTGAAAGATGTGACCATAGAAAACTTTTCTGTGTCAGCTCGGGGTAAAGAACTCCTTAAGAATGCATCAGTAAAGATATCTCATGGGAAGAGGTATGGTTTGGTTGGGCCCAATGGAAAGGGAAAGTCCACATTGTTGAAGCTCCTTGCCTGGAGGAAGATACCAGTGCCAAAGAATATTGATGTGCTTCTGGTTGAACAGGAGGTAGTTGGTGATGATAAAACAGCACTTGAAGCTGTTGTTTCAGCTAATAAAGAACTTGTTAAAACCCGACAAGAAGTGGCTCTTCTTCAAAATGCAAGTTCTGCTGAAGAAAGTGTAGACAAGGATGATGGACTTGAAGATGATGCAGGAGAGAAGCTTGCTGAGCTGTATGACAAGTTACAGCTGATGGGATCTGATGCAGCTGAAGCTCAAGCATCAAAGATTTTAGCAGGATTAGGTTTTACCAAGGATATGCAGGGCCGTGCTACAAAGTCATTTAGTGGGGGTTGGAGGATGAGAATTTCTTTAGCCAGAGCACTTTTTGTTCAACCAACTCTATTATTGCTTGATGAACCAACAAATCATCTTGATCTGAGAGCTGTTCTCTGGTTGGAGGAGTACTTGTGCCGTTGGAAGAAGACTTTGGTGGTCGTTTCACATGATAGGGATTTCCTAAATACAGTTTGCAATGAAATTATTCATCTGCATGATTTGAAACTTCATATCTACCGTGGAAATTTTGATGATTTTGAAAGTGGTTATGAGCAGCGTCGCAAGGAGATGAATAAGAAGTTTGAGATTTATGATAAGCAGATGAAAGCAGCCAAAAGAAGCGGAAATCGGGTTCAGCAGGAAAAGGTGAAGGATCGGGCCAAGTTTACGGCTTTGAAGGAAGCAGCAAAAAGCAAGGGCAAGAGCAAGGTTGATGAGGATGAAGCCCCAGCAGAGGTTCCACAAAAGTGGAGGGATTACAGTGTTGAGTTTCACTTCCCTCAACCCACTGAACTAACACCTCCTCTGCTGCAGCTTATTGAAGTGAGCTTCAGCTATCCGAATCGACAGGATTTCAGACTCTCAAATGTTGATGTTGGCATTGATATGGGGACTCGTGTAGCCATTGTAGGGCCTAACGGAGCTGGGAAATCAACGCTGCTGAATCTTCTTGCTGGTGACTTGACTCCAACTGAGGGTGAAGTTCGAAGAAGTCAGAAATTGAGGATTGGAAGATATTCCCAGCACTTTGTGGACCTTCTAACCATGGATGAAACGCCTGTTCAGTATCTTCTTCGTCTCCATCCAGATCAGGAAGGACTCAGTAAGCAGGAGGCTGTTAGAGCAAAGCTCGGTAAGTTTGGATTACCTAGCCATAATCATCTCACCCCTATCGTCAAGCTATCAGGAGGGCAGAAAGCTCGGGTGGTGTTCACATCAATATCCATGTCAAAGCCCCACATTTTGCTATTGGATGAACCAACTAATCATCTGGATATGCAAAGTATTGATGCATTAGCTGATTCATTGGATGAGTTCACTGGTGGAGTTGTTCTTGTTAGTCATGATTCTAGATTGATATCACGCGCATGCGAGGATGAAGAGAGAAGTCAAATATGGGTAGTTGAGGATGGTACCGTCAAATTCTTTGATGGAACTTTTGAGGATTACAAGTACGAGCTACTGAGAGAAATTAAAGCTGAAGTTGATGATTGA 2160 0.4366 MGRKKSEEAGPATKAKKEKFSVSALLASMDEKPDKPKKGSSSSSKPKAKSAPKVSAYTDGIDLPPSDDEDEDIMKEEQEQNSVAKRSTQQQKPELKPLDVAISDKELKKRERKDILAAHAAELAKQEALKDDRDAFTVVIGSRTSVLDGENDADANVKDVTIENFSVSARGKELLKNASVKISHGKRYGLVGPNGKGKSTLLKLLAWRKIPVPKNIDVLLVEQEVVGDDKTALEAVVSANKELVKTRQEVALLQNASSAEESVDKDDGLEDDAGEKLAELYDKLQLMGSDAAEAQASKILAGLGFTKDMQGRATKSFSGGWRMRISLARALFVQPTLLLLDEPTNHLDLRAVLWLEEYLCRWKKTLVVVSHDRDFLNTVCNEIIHLHDLKLHIYRGNFDDFESGYEQRRKEMNKKFEIYDKQMKAAKRSGNRVQQEKVKDRAKFTALKEAAKSKGKSKVDEDEAPAEVPQKWRDYSVEFHFPQPTELTPPLLQLIEVSFSYPNRQDFRLSNVDVGIDMGTRVAIVGPNGAGKSTLLNLLAGDLTPTEGEVRRSQKLRIGRYSQHFVDLLTMDETPVQYLLRLHPDQEGLSKQEAVRAKLGKFGLPSHNHLTPIVKLSGGQKARVVFTSISMSKPHILLLDEPTNHLDMQSIDALADSLDEFTGGVVLVSHDSRLISRACEDEERSQIWVVEDGTVKFFDGTFEDYKYELLREIKAEVDD 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00854 719 MobiDBLite consensus disorder prediction 1 15 - -
Accr1g00854 719 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 408 IPR027417 -
Accr1g00854 719 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 133 712 - -
Accr1g00854 719 FunFam ABC transporter F family member 4 457 719 - -
Accr1g00854 719 FunFam ABC transporter F family member 4 158 441 - -
Accr1g00854 719 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 160 420 IPR003439 GO:0005524
Accr1g00854 719 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 471 706 IPR027417 -
Accr1g00854 719 CDD ABCF_EF-3 160 390 - -
Accr1g00854 719 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 492 717 IPR003439 GO:0005524
Accr1g00854 719 ProSitePatterns ABC transporters family signature. 317 331 IPR017871 GO:0005524|GO:0016887
Accr1g00854 719 Gene3D - 157 443 IPR027417 -
Accr1g00854 719 Gene3D - 455 718 IPR027417 -
Accr1g00854 719 MobiDBLite consensus disorder prediction 1 102 - -
Accr1g00854 719 Coils Coil 409 429 - -
Accr1g00854 719 Coils Coil 236 256 - -
Accr1g00854 719 CDD ABCF_EF-3 492 694 - -
Accr1g00854 719 SMART AAA_5 184 389 IPR003593 GO:0016887
Accr1g00854 719 SMART AAA_5 518 694 IPR003593 GO:0016887
Accr1g00854 719 Pfam ABC transporter 509 644 IPR003439 GO:0005524
Accr1g00854 719 Pfam ABC transporter 175 345 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00854 Accr-Chr1 18366595 18368754 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00854 492 695 Calmodulin-binding Proteins AT2G36910 28.251 5.48e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00854 K06184 - qsa:O6P43_012151 1197.19