Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00849 ATGCCAGTTGAACACTGTGGACTACTGGATGAGTTCAAGAGAGTGAGTGAAACACCCATCAACAATAGAAGCTTTGAAAATGTTGACGTCGCCGACACTATGACAGTCAATGGAAGACGAAGACACCAAGACAGTGACGGGGAGAACACTAAAACTAAGCACCCACAACTGCTTTATGAGGCAAAGCTGTATCATATTCTTCAAGGAGGAAGTGGAATTCCTAGCATAAGGTGGTCTGGTGTAGACGGGGAGGACAATGTGCTAGTTATTGATTTGCTGGGACCCAGTCTTGAAGATCTGTTTGTTTATTGTGGAAGAAAGTTTTCGTTGAAGACTGTATTAATGTTGGCTGATCAGATGATCACTAGAATAGAATATGTTCATTCTAAGGGTTTTCTACATAGAGATATAAAACCTGATAACTTTCTCATGGGACTTGGTCGTAAAGCAAATCAGGTTTACATAATTGACTTTGGGCTTGCAAAACGATATCGGGACCCCACAACTAATCGTCATATTCCTTACCGGGAGGACAAAAACTTGACAGGCACTGCACGTTATGCAAGCTGTAATACTCATCTTGGTATTGAGCAAAGCCGCCGGGATGATTTGGAGTCACTAGGATATGTGCTTTTGTACTTCCTTAGAGGAAGTCTTCCTTGGCAAGGTCTAAAGGCTGCAACAAAGAAGCAAAAATATGATAAAATACGTGAAAAGAAAGTATCAACTCCTATTGAGGTCCTAGGCAAATCTCATCCTGTAGAGTTTGCTTCGTACTTTCATTATTGCCACTCTTTGACGTTTGACCAGCGACCTGATTATGGATTTTTGAAGCGTCTATTCCGGGACCTATTTGCTCAACAAGGTTTTGAATTGGATCATGTGTTTGATTGGAACATTTTAAAGTACCAGCAGACACAGAAGATTAAAGTTCAGCCTCAAACATCTCCATCTCCTGGAGCAAGCAACAGTTATCCAATGCCAACAGGTGTTTATGCTTATTCAGGGGATGTCTCAGAGCACATTAGATCTGGAAATGCTACTGGTTCTGGTGTTAAGATGCAGTTTAAATCACCAGCAGGAAAAAATATAGGTGTTAGTAATCCTCTTGACAAGAATGTTTTTGAAGAAGCAAATATGCCTTCTACTTCATATTCGCATGCTGGTACCTCAAAAAGGAACTCCTTGAAGCCTTCCTTGACTCCTGAAGCTGCAAACCCTGGTCGTGGCCGAGGCAGTAAAATTGGTCCTTCAAATAGCTGGATTTCGTCTCTGCAGCAAAATTGGTCCTTCAAGTAG 1299 0.4157 MPVEHCGLLDEFKRVSETPINNRSFENVDVADTMTVNGRRRHQDSDGENTKTKHPQLLYEAKLYHILQGGSGIPSIRWSGVDGEDNVLVIDLLGPSLEDLFVYCGRKFSLKTVLMLADQMITRIEYVHSKGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKRYRDPTTNRHIPYREDKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKIREKKVSTPIEVLGKSHPVEFASYFHYCHSLTFDQRPDYGFLKRLFRDLFAQQGFELDHVFDWNILKYQQTQKIKVQPQTSPSPGASNSYPMPTGVYAYSGDVSEHIRSGNATGSGVKMQFKSPAGKNIGVSNPLDKNVFEEANMPSTSYSHAGTSKRNSLKPSLTPEAANPGRGRGSKIGPSNSWISSLQQNWSFK 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00849 432 MobiDBLite consensus disorder prediction 381 401 - -
Accr1g00849 432 MobiDBLite consensus disorder prediction 381 432 - -
Accr1g00849 432 SUPERFAMILY Protein kinase-like (PK-like) 54 298 IPR011009 -
Accr1g00849 432 Pfam Protein kinase domain 56 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00849 432 MobiDBLite consensus disorder prediction 345 368 - -
Accr1g00849 432 FunFam CK1 family protein kinase 34 327 - -
Accr1g00849 432 ProSiteProfiles Protein kinase domain profile. 14 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00849 432 MobiDBLite consensus disorder prediction 416 432 - -
Accr1g00849 432 PANTHER CASEIN KINASE-RELATED 48 363 - -
Accr1g00849 432 Gene3D Transferase(Phosphotransferase) domain 1 28 325 - -
Accr1g00849 432 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Accr1g00849 432 SMART serkin_6 25 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00849 Accr-Chr1 18310347 18315059 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00849 99 275 MAP Kinase Kinase Kinase AT1G62400 29.834 5.95e-11 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Accr1g00849 Pkinase 6.8e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00849 K08960 - gmx:100800342 654.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g00849 1 18310347 18315059 Accr1g00849 1 18310347 18315059 ECH