Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00837 ATGGAAAGCTCAGAGAAGTTTTCTCAGAGAAGAAACGGCTTGAATCTTAAGGCTACTGAACTAAGGCTCGGGTTACCCGGGTCGGAGTCACCCGAGAGGGATTCGGATTCGGAGGAAAAGAACGAGTATCCATTAGGCATACTGAAAAGTCTCGTGTCTGGGGCCAAGAGGGGCTTCTCAGATGCCATTGATGGCAGTTCTGGGAAGTGGGTTCTCTACGGAAAAGGTGGTTCTGATATGGGTTTGGGTAAAGATTGTGGCTTGTTCTCTCCCAGAGGAGCTAACTCCGGCAAGACCCCTGTCGGGTCGGATTCCGGCAAACATCAAGCGGGTTTGGGTCTCTCCGCTGTGAAAGATAGTATTCCTCAGCCAACAAAGCCTTTGCATGAGAAGAAGCCTCAGTTTCCTGCTCCTGCTTCAAAGGCACAAGTTGTGGGATGGCCACCAATCCGATCTTTTCGGAAGAACTCGATGGCATCTCAGCCTCAAAAGAATGGAGAAGATGCAGAATCAGGAAAGAGTGGTGGGTGTCTTTATGTAAAAGTGAGCTTGGATGGTGCTCCTTACTTGAGGAAGGTTGATCTCAACAACTTTGCCTCTTACAAGGAACTTTCTTCTGCACTGGAAAAGATGTTTAGTGGCTTTACAATGAGTCAATGTGGCTCTCACGGGGTTTCTGGTCGGGACAATATGAGTGAGAGTAGATTGATGGATCTGCTTAATGGTTCAGAATACGTGCTTACTTATGAGGACAAGGATGGCGATTGGATGCTAGTTGGTGATGTTCCTTGGGAGATGTTCACTGATTCTTGCAAGAGGATGAGGATAATGAAGAGTTGTGAAGCAATTGGGTTAGCACCGAGAGCGATGGAAAAGTGCAAGAGTCGGAACTAG 894 0.4765 MESSEKFSQRRNGLNLKATELRLGLPGSESPERDSDSEEKNEYPLGILKSLVSGAKRGFSDAIDGSSGKWVLYGKGGSDMGLGKDCGLFSPRGANSGKTPVGSDSGKHQAGLGLSAVKDSIPQPTKPLHEKKPQFPAPASKAQVVGWPPIRSFRKNSMASQPQKNGEDAESGKSGGCLYVKVSLDGAPYLRKVDLNNFASYKELSSALEKMFSGFTMSQCGSHGVSGRDNMSESRLMDLLNGSEYVLTYEDKDGDWMLVGDVPWEMFTDSCKRMRIMKSCEAIGLAPRAMEKCKSRN 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00837 297 MobiDBLite consensus disorder prediction 89 142 - -
Accr1g00837 297 SUPERFAMILY CAD & PB1 domains 172 278 - -
Accr1g00837 297 MobiDBLite consensus disorder prediction 27 43 - -
Accr1g00837 297 Gene3D - 172 290 - -
Accr1g00837 297 FunFam Auxin-responsive protein 172 289 - -
Accr1g00837 297 MobiDBLite consensus disorder prediction 1 44 - -
Accr1g00837 297 Pfam AUX/IAA family 19 288 IPR033389 -
Accr1g00837 297 ProSiteProfiles PB1 domain profile. 177 279 IPR000270 GO:0005515
Accr1g00837 297 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 14 284 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00837 Accr-Chr1 18075902 18078732 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00837 180 287 B3 DNA Binding Superfamily AT4G23980 30.556 1.57e-08 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Accr1g00837 AUX_IAA 2.5e-87 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00837 K14484 - qsa:O6P43_007901 420.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g00837 1 18075902 18078732 Accr1g00837 1 18075902 18078732 ECH