Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00831 ATGAATAGAAGCGGCGTCGTCGAGAGCTCGCCGGTGCAACAAATGATGGCGGCCGGAAACCCTAATTGGTGGAACATAAACCATACCATGAGGCCTCCTAATCATCAACCTTCACCACCAAATAATTCTTCTTCTCCTTTCTTCTTCTCATCATCATCTTCCACTCCTAATTCTTCCACTAATAACTTCCTCTCTCCATATCCTCCTTTCTCTAATTCTCTTCCGTTTCCTTCTACTTGGCATGCAAATCAAGATCATCAGCTTCCTGTTTCCTGGAGCCAACTTCTCATGGGTGAAGAAGATAAGAAAATGGAGAACTGGGAGGAGCAAGTGTTGATGAGTCAGGCTCAAAATGTTGGTCTTGTGGATGTGAAGCAAGAGAGTTCATCGGTTGACAGCTATGGGTATGGAGGAGGACATGTCGGTGCTGCTAGCGGCGGTGGCGGAAATAACAGTAACGAAGAGTTTCAGGTGGCGGCCTCCAGCGGAGGCCGCGGCGGTGCTAATTGGTCTCATCATCAACATCAGAGAGTGCCTCTTTCTGCTGGTGCTTCTTCTTCACCAAAATCCTGTGTGACAAGTTTCAGCAGCAACATGTTGGATTTCTCTAGCAGTAAGACAAATTCTAGGCATCCTCCTCCAGATCGATCTTCTGAGTGTAACAGCAATGGAGGTGGTGGGGCAGTGAAGAAAGCTAGGGTTCAACCATCTACGACGACACAGTCTAGCAGCTTCAAGGTTAGAAAAGAGAAATTAGGTGATAGAATTACTGCCCTCCATCAGTTAGTTTCCCCCTTCGGAAAGACTGATACAGCGTCTGTCTTGTTAGAAGCTATAGGATATATCAGATTCCTTCAGAGTCAAATCGAGGCCCTTAGCTTACCATACTTGGGCACCACTGGATCATCATCATCAAACATCAGCAGGAACCAACACTCTGTTCAAGATGAGAAGAGTTGTATATTCCGTGAAGACCCTGGTCAGGAATTAGAGGAAGAACCAAAGAAGGATCTGAAGAGTAGAGGGTTGTGTTTGGTTCCAGTTTCATGCACACTTCAAGTTGGGAGTGATAATGGAGCTGATTACTGGGCTCCTGCTTTTGGAGGAGGCTTTTGA 1116 0.4633 MNRSGVVESSPVQQMMAAGNPNWWNINHTMRPPNHQPSPPNNSSSPFFFSSSSSTPNSSTNNFLSPYPPFSNSLPFPSTWHANQDHQLPVSWSQLLMGEEDKKMENWEEQVLMSQAQNVGLVDVKQESSSVDSYGYGGGHVGAASGGGGNNSNEEFQVAASSGGRGGANWSHHQHQRVPLSAGASSSPKSCVTSFSSNMLDFSSSKTNSRHPPPDRSSECNSNGGGGAVKKARVQPSTTTQSSSFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLGTTGSSSSNISRNQHSVQDEKSCIFREDPGQELEEEPKKDLKSRGLCLVPVSCTLQVGSDNGADYWAPAFGGGF 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00831 371 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 236 285 IPR011598 GO:0046983
Accr1g00831 371 MobiDBLite consensus disorder prediction 23 60 - -
Accr1g00831 371 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 246 296 IPR036638 GO:0046983
Accr1g00831 371 MobiDBLite consensus disorder prediction 41 60 - -
Accr1g00831 371 FunFam transcription factor bHLH68 isoform X1 243 296 - -
Accr1g00831 371 MobiDBLite consensus disorder prediction 202 246 - -
Accr1g00831 371 MobiDBLite consensus disorder prediction 202 224 - -
Accr1g00831 371 Gene3D - 240 295 IPR036638 GO:0046983
Accr1g00831 371 MobiDBLite consensus disorder prediction 145 187 - -
Accr1g00831 371 CDD bHLH_AtbHLH_like 241 293 IPR045239 -
Accr1g00831 371 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 57 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00831 Accr-Chr1 17890807 17895271 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00831 1 328 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 41.667 5.95e-65 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00831 - - pcin:129293482 462.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g00831 1 17890807 17895271 Accr1g00831 1 17890807 17895271 ECH