Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00830 ATGAATAGAAGCGGCGTCGTCGAGAGCTCGCCGGTGCAACAAATGATGGCGGCCGGAAACCCTAATTGGTGGAACATAAACCATACCATGAGGCCTCCTAATCATCAACCTTCACCACCAAATAATTCTTCTTCTCCTTTCTTCTTCTCATCATCATCTTCCACTCCTAATTCTTCCACTAATAACTTCCTCTCTCCATATCCTCCTTTCTCTAATTCTCTTCCGTTTCCTTCTACTTGGCATGCAAATCAAGATCATCAGCTTCCTGTTTCCTGGAGCCAACTTCTCATGGGTGAAGAAGATAAGAAAATGGAGAACTGGGAGGAGCAAGTGTTGATGAGTCAGGCTCAAAATGTTGGTCTTGTGGATGTGAAGCAAGAGAGTTCATCGGTTGACAGCTATGGGTATGGAGGAGGACATGTCGGTGCTGCTAGCGGCGGTGGCGGAAATAACAGTAACGAAGAGTTTCAGGTGGCGGCCTCCAGCGGAGGCCGCGGCGGTGCTAATTGGTCTCATCATCAACATCAGAGAGTGCCTCTTTCTGCTGGTGCTTCTTCTTCACCAAAATCCTGTGTGACAAGTTTCAGCAGCAACATGTTGGATTTCTCTAGCAGTAAGACAAATTCTAGGCATCCTCCTCCAGATCGATCTTCTGAGTGTAACAGCAATGGAGGTGGTGGGGCAGTGAAGAAAGCTAGGGTTCAACCATCTACGACGACACAGTCTAGCAGCTTCAAGGTTAGAAAAGAGAAATTAGGTGATAGAATTACTGCCCTCCATCAGTTAGTTTCCCCCTTCGGAAAGACTGATACAGCGTCTGTCTTGTTAGAAGCTATAGGATATATCAGATTCCTTCAGAGTCAAATCGAGGCCCTTAGCTTACCATACTTGGGCACCACTGGATCATCATCATCAAACATCAGCAGGAACCAACACTCTGAATTAGAGGAAGAACCAAAGAAGGATCTGAAGAGTAGAGGGTTGTGTTTGGTTCCAGTTTCATGCACACTTCAAGTTGGGAGTGATAATGGAGCTGATTACTGGGCTCCTGCTTTTGGAGGAGGCTTTTGA 1071 0.4641 MNRSGVVESSPVQQMMAAGNPNWWNINHTMRPPNHQPSPPNNSSSPFFFSSSSSTPNSSTNNFLSPYPPFSNSLPFPSTWHANQDHQLPVSWSQLLMGEEDKKMENWEEQVLMSQAQNVGLVDVKQESSSVDSYGYGGGHVGAASGGGGNNSNEEFQVAASSGGRGGANWSHHQHQRVPLSAGASSSPKSCVTSFSSNMLDFSSSKTNSRHPPPDRSSECNSNGGGGAVKKARVQPSTTTQSSSFKVRKEKLGDRITALHQLVSPFGKTDTASVLLEAIGYIRFLQSQIEALSLPYLGTTGSSSSNISRNQHSELEEEPKKDLKSRGLCLVPVSCTLQVGSDNGADYWAPAFGGGF 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00830 356 Gene3D - 240 295 IPR036638 GO:0046983
Accr1g00830 356 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 236 285 IPR011598 GO:0046983
Accr1g00830 356 MobiDBLite consensus disorder prediction 23 60 - -
Accr1g00830 356 MobiDBLite consensus disorder prediction 41 60 - -
Accr1g00830 356 MobiDBLite consensus disorder prediction 300 319 - -
Accr1g00830 356 MobiDBLite consensus disorder prediction 202 246 - -
Accr1g00830 356 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 54 339 - -
Accr1g00830 356 MobiDBLite consensus disorder prediction 202 224 - -
Accr1g00830 356 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 246 296 IPR036638 GO:0046983
Accr1g00830 356 MobiDBLite consensus disorder prediction 145 187 - -
Accr1g00830 356 CDD bHLH_AtbHLH_like 241 293 IPR045239 -
Accr1g00830 356 FunFam transcription factor bHLH68 isoform X1 243 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00830 Accr-Chr1 17890807 17895271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00830 1 312 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 41.053 6.73e-58 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00830 - - pcin:129293482 432.565