Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00811 ATGGGAGAAGGTGAGGGGGGAGATTTCCCTCCGAAGAATGTGTCATCGGATTCTACAGGAGCAGCGGTGCCGTCGGATGTTCCGGCAAAGAAGCTGGCGAGGCAGCTCGATTTCACCGGCTATAGTGGCACGCCCTTGACTGAACACCCGCAGCCGCATCCGCAGCCTCAGTTGCAGGCGGTGGCGCAAAGTCAGCCGCAGCCACGTCCTGTTACTACGCAACCGGTTGCTGTGATGCCCATGCCACCGCAGGTTCCTCATTCTTCAGCAAGGGTTGGGAAACCAGAATCTCCAAAATCAAGATCAAGGGCCAACTTTGATATGAAGGATGTTACTCCAAAGAAGCAAAAACAGTGTAATTGTAAACACTCAAAATGTCTAAAGTTATATTGTGAATGTTTTGCATCGGGAATATATTGTGATGGGTGCAACTGTGCAAACTGCTATAACAATGTTGAAAATGAAGCTGCTAGACGAGAAGCTGTTGAAGCCACTTTGGAGCGCAATCCAAATGCATTTAGGCCAAAAATTGCAAGCAGCCCTCATGGAACACGCGATAGCAGGGAGGACGCTGGTGAAATTTTAATACTAGGAAAGCATAACAAGGGGTGCCATTGCAAAAAATCTGGATGCCTCAAGAAGTACTGTGAGTGCTTCCAAGCCAACATTCTTTGCTCTGAAAATTGTAAATGCATGGACTGCAAAAATTTTGAGGGAAGTGAAGAGAGACAAGCTTTGTTCCATGGAGATCAGAATAATAACATGGCACATATCCAGCAGGCAGCAAATGCTGCCATAACTGGAGCAATTGGATCTTCTGGTTATTTATCCCCTCCAGTGTCCAAGAAAAGAAAAGGCCAGGAACTCTTCTTTGGCCCAACAACCAAGGATACATCTGCTGGCAGGCTTGGGCAATTTCAACAGGCAAACCTCAACAAAAGTCTTGCACCCTCATCCTTGTCTCCTGTCCCTGGTGCCCGTGTTGGAACTGCAACATTAGGGCCTTCTAAATTTACATACAGATCCCTTCTGGCAGACATCATTCAACCACAGCACTTGAAGGAGCTTTGCTCTGTACTGGTGCTAGTATCAGGACAGGCTGCAAAGACTCTTACAGATCAGAAAATGTTGATGGAAAAGAATGCAGAAGATGTGGTGGAAACTTCCGTAGCTTCTTCAACTCAAGAGCAATTGCCAAGTCGAAAGGAAGTTGATGTTGAGAAAGCTATGGCTGATGACTGTTCAAGTGCAAACCAAGCAGATAAAATCAGCCCAGATAATTCTAGTTCAGACGGTGCTGATGCCCCGAAAAGCAGGCCAATGTCTCCTGGAACCTTGGCCTTGATGTGTGATGAGCAAGATACAATGTTCATGACAGCTCCATCTCCTAATGGTTCAATGGATCATGCTTGCAATACGTCTTTGCGTTCTCGTTACGGACAAGGCAATGCAGAGGTTTATGCAGAGCAAGAAAGAATTGTTTTGACAAAGTTTAGAGATTTTCTTAATCGGGTTATCACAATGGGAGAATTAAATGAAACAAAGTGTTCTTCATTAACCAGAAGTGAATTAGAGATTCAAAAGGAGGCAATAAACAATGGCAGTGGAAGTGCTGGTGTTGAAATGGCTCATCATCAGCAACTGGGAGCGATTGGTAATGGAGTTGTCAATGCTGTTGTGCCACCCATGGCCTCTAGTATGAACATGATTGCTTCAGAGGCTCCTGGTAATCTTGTCCCTGAAAATGGGGATAGTAAGCCTAAGATTGAAAAGGAGATGTGA 1782 0.4545 MGEGEGGDFPPKNVSSDSTGAAVPSDVPAKKLARQLDFTGYSGTPLTEHPQPHPQPQLQAVAQSQPQPRPVTTQPVAVMPMPPQVPHSSARVGKPESPKSRSRANFDMKDVTPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCANCYNNVENEAARREAVEATLERNPNAFRPKIASSPHGTRDSREDAGEILILGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDQNNNMAHIQQAANAAITGAIGSSGYLSPPVSKKRKGQELFFGPTTKDTSAGRLGQFQQANLNKSLAPSSLSPVPGARVGTATLGPSKFTYRSLLADIIQPQHLKELCSVLVLVSGQAAKTLTDQKMLMEKNAEDVVETSVASSTQEQLPSRKEVDVEKAMADDCSSANQADKISPDNSSSDGADAPKSRPMSPGTLALMCDEQDTMFMTAPSPNGSMDHACNTSLRSRYGQGNAEVYAEQERIVLTKFRDFLNRVITMGELNETKCSSLTRSELEIQKEAINNGSGSAGVEMAHHQQLGAIGNGVVNAVVPPMASSMNMIASEAPGNLVPENGDSKPKIEKEM 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00811 593 Coils Coil 149 169 - -
Accr1g00811 593 SMART CXC_2 114 154 IPR033467 -
Accr1g00811 593 SMART CXC_2 199 240 IPR033467 -
Accr1g00811 593 MobiDBLite consensus disorder prediction 417 435 - -
Accr1g00811 593 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 202 236 IPR005172 -
Accr1g00811 593 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 116 151 IPR005172 -
Accr1g00811 593 MobiDBLite consensus disorder prediction 40 72 - -
Accr1g00811 593 PANTHER TESMIN/TSO1-RELATED 49 510 IPR028307 -
Accr1g00811 593 MobiDBLite consensus disorder prediction 1 105 - -
Accr1g00811 593 ProSiteProfiles CRC domain profile. 115 239 IPR005172 -
Accr1g00811 593 MobiDBLite consensus disorder prediction 388 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00811 Accr-Chr1 17067860 17077233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00811 1 541 CPP Transcription Factor Family AT4G29000 56.667 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Accr1g00811 TCR 3.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00811 - - qsa:O6P43_007909 860.522