Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00782 ATGAAGCATGTTACCAAGCAAGAATTTATCGCCTCGCTGCGAAGGAAAAGTAGCGGATTTTCCAGGGGACCTTCTATATACAGGGGCGTCACAAGGCAACGCCAACAGGGTAGATGGCTAGCTAGAATTGGGCGTGTTGCAGGGAACAAGGATCTGTACCTTGGAACATTTGCCACTGAAGAGGAAGCAGCTGAGGCATACGATACTGCAGCCATTAAGTTTAGGGGTGCAAATGCTCTGACCAACTTTGAGACGAATCGATATGATGTTGAAGCCATCATGAAGAGTTCTCTTCCCATGGGTGTGGTGGCGAAACGCCTGAAGCTCTCGCTCGAATCCGAGCAGAAAGCGGCACCGAACAATAATAGCCAACAAATCCAATGTACCAACATGAGTAACAACATCAACTTCTCACCAATTCAGACAGTTTCCTCTGTCCCTTGTGCAATTCCATGTTATCCCGCTGCTGATGCTTACCATCACCACAATCTCTTGAACCATTTTCGTCCTTCTGATGCCGGCGCTACTGCAGAATCGGCGGTCACTAACCATTCAGCGACTCCATATCCTACCCTGCCTGCGCCTTCTGAGTTCTTTATATGGCCTCCGCATCAGTCATATTGA 624 0.484 MKHVTKQEFIASLRRKSSGFSRGPSIYRGVTRQRQQGRWLARIGRVAGNKDLYLGTFATEEEAAEAYDTAAIKFRGANALTNFETNRYDVEAIMKSSLPMGVVAKRLKLSLESEQKAAPNNNSQQIQCTNMSNNINFSPIQTVSSVPCAIPCYPAADAYHHHNLLNHFRPSDAGATAESAVTNHSATPYPTLPAPSEFFIWPPHQSY 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00782 207 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 125 - -
Accr1g00782 207 SUPERFAMILY DNA-binding domain 25 85 IPR016177 GO:0003677
Accr1g00782 207 ProSiteProfiles AP2/ERF domain profile. 26 84 IPR001471 GO:0003700|GO:0006355
Accr1g00782 207 SMART rav1_2 26 90 IPR001471 GO:0003700|GO:0006355
Accr1g00782 207 Pfam AP2 domain 26 76 IPR001471 GO:0003700|GO:0006355
Accr1g00782 207 Gene3D AP2/ERF domain 26 86 IPR036955 GO:0003700|GO:0006355
Accr1g00782 207 PRINTS Ethylene responsive element binding protein signature 66 86 IPR001471 GO:0003700|GO:0006355
Accr1g00782 207 PRINTS Ethylene responsive element binding protein signature 27 38 IPR001471 GO:0003700|GO:0006355
Accr1g00782 207 CDD AP2 25 84 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00782 Accr-Chr1 16558570 16559443 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00782 2 91 AP2-EREBP Transcription Factor Family AT5G65510 38.384 2.19e-11 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr1g00782 AP2 3e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00782 K09285 - gmx:100777168 278.87