Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00777 ATGCCGCCGCCGGTACCGCCTCAGGGACCCAAAGTTGATCCATATGGTGGCCCACAGCGTCAATGGCAACACAATGCTCCCCCTCCTCCTTCAGATCATGTGGTCTCTGTAATGCCAAAGCCACCACCCCCGCCACCACCCCCAGTTGCATCACGGCCCACCCAACCGCCTGCTTATGGTCAACCTCCACCGCCTCCGCCTCCTTTCATAAGCAGCAGTGGTGGGTCTGGTTCTAACTATTCAGGTGGTGATAACATTCTTCCACCTCCCTCTCCAACCTTTGCACTGGGTTTCTCAAAGAGTGCATTTACATATGAGGAGCTGGCACGGGCAACAGATGGGTTCTCTGATGCTAACCTCCTTGGACAAGGTGGATTTGGGTATGTGCACAGAGGCATTCTTCCGAATGGAAAGGAAGTTGCTGTGAAGCAGCTTAAGGCTGGAAGTGGTCAGGGGGAGCGTGAGTTTCAAGCTGAAGTTGAGATCATTAGTCGGGTTCATCACAAACATCTTGTTTCTTTGGTTGGATACTGCATTACTGGGACACAGAGGTTGCTTGTTTATGAGTTTGTTCCCAACAATACATTGGAGTTTCACTTGCATGGAAAAGGTAGGCCTACCATGGACTGGCCCACAAGACTAAAAATTGCTTTAGGATCAGCAAAAGGATTGGCGTATCTTCATGAGGACTGTCACCCTAAGATCATCCACCGCGATATCAAAGCTGCCAACATACTCCTAGATTTTAAGTTTGAAGCAAAGGTGGCAGATTTTGGACTAGCAAAGTTTACATCTGATGTTAATACTCATGTTTCCACTCGAGTGATGGGGACATTTGGTTACCTGGCTCCAGAATATGCTTCTAGTGGCAAACTCTCAGAAAAATCAGATGTTTTCTCCTTTGGAGTCATGCTTCTGGAATTAATTACTGGACGCCGACCAGTCGATTCAAGCCATACATATATGGAGGATAGTTTGGTAGACTGGGCAAGGCCTATGCTCACTCGTGCATTGGAAGAGGAGAATTTTGATTCTGTGGTTGATCCAAGACTCCAACATGATTATGACCCCAATGAGATGGCTCGTATGGTCGCATGTGCTGCAGCTTGCATACGACATTCAGCAAAACGCAGGCCAAAGATGAGCCAGGTTGTTCGCGCTCTAGAAGGAGATGTATCCCTAGCGGATCTTAATGAAGGAATTAAACCAGGCCATAGCTCTGTCTACAGTTCTCATGGAAGTTCGGATTATGACACAGCTCAATACAATGAGGACATGAAAAAATACAGGAAAATGGCATTCGGAGGAGGGACCAATGAATATGGTGCCAGTGGCGAATACAGTGGGCCGCCTACGAGCGAGTATGGGTTGTACCCTTCTGGATCGAGCAGTGAAGACCAGAGTCGCCGGACCACAAGGGAAATGGAAATGAGAAAGATGAAGAACAGCCAAGGTTTCAGTGGAAGTTCATAA 1473 0.4793 MPPPVPPQGPKVDPYGGPQRQWQHNAPPPPSDHVVSVMPKPPPPPPPPVASRPTQPPAYGQPPPPPPPFISSSGGSGSNYSGGDNILPPPSPTFALGFSKSAFTYEELARATDGFSDANLLGQGGFGYVHRGILPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYCITGTQRLLVYEFVPNNTLEFHLHGKGRPTMDWPTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKFTSDVNTHVSTRVMGTFGYLAPEYASSGKLSEKSDVFSFGVMLLELITGRRPVDSSHTYMEDSLVDWARPMLTRALEEENFDSVVDPRLQHDYDPNEMARMVACAAACIRHSAKRRPKMSQVVRALEGDVSLADLNEGIKPGHSSVYSSHGSSDYDTAQYNEDMKKYRKMAFGGGTNEYGASGEYSGPPTSEYGLYPSGSSSEDQSRRTTREMEMRKMKNSQGFSGSS 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00777 490 SUPERFAMILY Protein kinase-like (PK-like) 92 388 IPR011009 -
Accr1g00777 490 ProSitePatterns Protein kinases ATP-binding region signature. 121 143 IPR017441 GO:0005524
Accr1g00777 490 FunFam Proline-rich receptor-like protein kinase PERK1 191 399 - -
Accr1g00777 490 SMART serkin_6 115 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00777 490 FunFam proline-rich receptor-like protein kinase PERK1 93 190 - -
Accr1g00777 490 MobiDBLite consensus disorder prediction 72 86 - -
Accr1g00777 490 ProSiteProfiles Protein kinase domain profile. 115 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00777 490 MobiDBLite consensus disorder prediction 443 490 - -
Accr1g00777 490 Pfam Protein tyrosine and serine/threonine kinase 120 388 IPR001245 GO:0004672|GO:0006468
Accr1g00777 490 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 79 460 IPR047117 -
Accr1g00777 490 MobiDBLite consensus disorder prediction 32 71 - -
Accr1g00777 490 MobiDBLite consensus disorder prediction 1 92 - -
Accr1g00777 490 Gene3D Phosphorylase Kinase; domain 1 93 190 - -
Accr1g00777 490 Gene3D Transferase(Phosphotransferase) domain 1 191 399 - -
Accr1g00777 490 CDD STKc_IRAK 121 390 - -
Accr1g00777 490 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00777 Accr-Chr1 16450453 16453365 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00777 71 473 Trihelix Transcription Factor Family AT1G70460 59.506 2.62e-162 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Accr1g00777 PK_Tyr_Ser-Thr 7.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00777 - - gmx:100781944 785.793