Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00776 ATGTCAGCGACGCCTTCCCCCGGCTCTGCTCCGGCACCATCGTCGCCGCCGGCTCCGGCGACCAACAATACTGCTCCTCCGCCCAGCCCTTCAGCTCCTCCACCGTCCACCCCGGCCTCGCCGCCGCCAGCTACACCCTCTGCTCCACCGCCTGCGACTCCTTCGTCTCCTCCTCCAGCGGCCCCAACTCCACCTTCCCCGAGCCCTCCTTCTCTTTCCCCTCCATCAACCTCGCCACCACCGGAATCTTCGGCGTCGCCTCCTCCACCGTCCGCTCCTAACACTCCGCCGAGTCCGCCAAGTCGCAGCTCGCCGCCTCCTCCGTCGGGCTCAAATTCGCCTTCTCCTCCGTCGGGCTCAAATTCGCCTTCTCCTCCGTCGGGCTCAAATTCGCCTTCGACTCCGAATCGAAGTCCACCACCACCGTCGTCAAAATCGTCTCCGCCATCTTCGTCATCGTCCTCATCGAGTGGCATATCAACTGGGGTGGTTGTCGCCATTGCCGTTGGGGCTGTTGCGGTTCTTCTGTTTTTGAGTATTCTCTGCGTTTGCTGTAGGAAGAGAAAGAGAAGACGTGATGAGGAGTACTATATGCCGCCGCCGGTACCGCCTCAGGGACCCAAAGTTGATCCATATGGTGGCCCACAGCGTCAATGGCAACACAATGCTCCCCCTCCTCCTTCAGATCATGTGGTCTCTGTAATGCCAAAGCCACCACCCCCGCCACCACCCCCAGTTGCATCACGGCCCACCCAACCGCCTGCTTATGGTCAACCTCCACCGCCTCCGCCTCCTTTCATAAGCAGCAGTGGTGGGTCTGGTTCTAACTATTCAGGTGGTGATAACATTCTTCCACCTCCCTCTCCAACCTTTGCACTGGGTTTCTCAAAGAGTGCATTTACATATGAGGAGCTGGCACGGGCAACAGATGGGTTCTCTGATGCTAACCTCCTTGGACAAGGTGGATTTGGGTATGTGCACAGAGGCATTCTTCCGAATGGAAAGGAAGTTGCTGTGAAGCAGCTTAAGGCTGGAAGTGGTCAGGGGGAGCGTGAGTTTCAAGCTGAAGTTGAGATCATTAGTCGGGTTCATCACAAACATCTTGTTTCTTTGGTTGGATACTGCATTACTGGGACACAGAGGTTGCTTGTTTATGAGTTTGTTCCCAACAATACATTGGAGTTTCACTTGCATGGAAAAGGTAGGCCTACCATGGACTGGCCCACAAGACTAAAAATTGCTTTAGGATCAGCAAAAGGATTGGCGTATCTTCATGAGGACTGTCACCCTAAGATCATCCACCGCGATATCAAAGCTGCCAACATACTCCTAGATTTTAAGTTTGAAGCAAAGGTGGCAGATTTTGGACTAGCAAAGTTTACATCTGATGTTAATACTCATGTTTCCACTCGAGTGATGGGGACATTTGGTTACCTGGCTCCAGAATATGCTTCTAGTGGCAAACTCTCAGAAAAATCAGATGTTTTCTCCTTTGGAGTCATGCTTCTGGAATTAATTACTGGACGCCGACCAGTCGATTCAAGCCATACATATATGGAGGATAGTTTGGTAGACTGGGCAAGGCCTATGCTCACTCGTGCATTGGAAGAGGAGAATTTTGATTCTGTGGTTGATCCAAGACTCCAACATGATTATGACCCCAATGAGATGGCTCGTATGGTCGCATGTGCTGCAGCTTGCATACGACATTCAGCAAAACGCAGGCCAAAGATGAGCCAGGTTGTTCGCGCTCTAGAAGGAGATGTATCCCTAGCGGATCTTAATGAAGGAATTAAACCAGGCCATAGCTCTGTCTACAGTTCTCATGGAAGTTCGGATTATGACACAGCTCAATACAATGAGGACATGAAAAAATACAGGAAAATGGCATTCGGAGGAGGGACCAATGAATATGGTGCCAGTGGCGAATACAGTGGGCCGCCTACGAGCGAGTATGGGTTGTACCCTTCTGGATCGAGCAGTGAAGACCAGAGTCGCCGGACCACAAGGGAAATGGAAATGAGAAAGATGAAGAACAGCCAAGGTTTCAGTGGAAGTTCATAA 2064 0.5189 MSATPSPGSAPAPSSPPAPATNNTAPPPSPSAPPPSTPASPPPATPSAPPPATPSSPPPAAPTPPSPSPPSLSPPSTSPPPESSASPPPPSAPNTPPSPPSRSSPPPPSGSNSPSPPSGSNSPSPPSGSNSPSTPNRSPPPPSSKSSPPSSSSSSSSGISTGVVVAIAVGAVAVLLFLSILCVCCRKRKRRRDEEYYMPPPVPPQGPKVDPYGGPQRQWQHNAPPPPSDHVVSVMPKPPPPPPPPVASRPTQPPAYGQPPPPPPPFISSSGGSGSNYSGGDNILPPPSPTFALGFSKSAFTYEELARATDGFSDANLLGQGGFGYVHRGILPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYCITGTQRLLVYEFVPNNTLEFHLHGKGRPTMDWPTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKFTSDVNTHVSTRVMGTFGYLAPEYASSGKLSEKSDVFSFGVMLLELITGRRPVDSSHTYMEDSLVDWARPMLTRALEEENFDSVVDPRLQHDYDPNEMARMVACAAACIRHSAKRRPKMSQVVRALEGDVSLADLNEGIKPGHSSVYSSHGSSDYDTAQYNEDMKKYRKMAFGGGTNEYGASGEYSGPPTSEYGLYPSGSSSEDQSRRTTREMEMRKMKNSQGFSGSS 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00776 687 CDD STKc_IRAK 318 587 - -
Accr1g00776 687 ProSitePatterns Serine/Threonine protein kinases active-site signature. 432 444 IPR008271 GO:0004672|GO:0006468
Accr1g00776 687 MobiDBLite consensus disorder prediction 229 268 - -
Accr1g00776 687 FunFam Proline-rich receptor-like protein kinase PERK1 388 596 - -
Accr1g00776 687 Gene3D Phosphorylase Kinase; domain 1 290 387 - -
Accr1g00776 687 FunFam proline-rich receptor-like protein kinase PERK1 290 387 - -
Accr1g00776 687 Pfam Protein tyrosine and serine/threonine kinase 317 585 IPR001245 GO:0004672|GO:0006468
Accr1g00776 687 MobiDBLite consensus disorder prediction 1 159 - -
Accr1g00776 687 Gene3D Transferase(Phosphotransferase) domain 1 388 595 - -
Accr1g00776 687 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 170 657 IPR047117 -
Accr1g00776 687 SMART serkin_6 312 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00776 687 ProSitePatterns Protein kinases ATP-binding region signature. 318 340 IPR017441 GO:0005524
Accr1g00776 687 SUPERFAMILY Protein kinase-like (PK-like) 289 585 IPR011009 -
Accr1g00776 687 MobiDBLite consensus disorder prediction 269 283 - -
Accr1g00776 687 MobiDBLite consensus disorder prediction 640 687 - -
Accr1g00776 687 MobiDBLite consensus disorder prediction 9 147 - -
Accr1g00776 687 ProSiteProfiles Protein kinase domain profile. 312 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g00776 687 MobiDBLite consensus disorder prediction 195 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00776 Accr-Chr1 16449862 16453365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00776 132 669 Trihelix Transcription Factor Family AT1G70460 48.429 8.87e-168 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Accr1g00776 PK_Tyr_Ser-Thr 1.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00776 - - gmx:100781944 828.55