Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00740 ATGGACTTCTTCTCTTTCTCTTCCCTTGAAACCAACCTTGCTATAGCCAAGCCGTTGGTTTCAAAGGCCGGCTCCGTCATCACCACCATAGTGCTTATCCGATCAGTGGTTCGAGACGTCTTGCCCAGGGAAATCCGAAACTGTTTATTTAGTGGTATCCGTGGAATCTTCAATCACTTGTCTTCCCAACTCACCATAGTAATTGATGAGATTGATGGTCTCATTACCAACCAAATCTACGATGCCGCACAAACTTACTTGGGCAAAAACATCTCTCCCTCCACTCGCAGAATCGAAGTTAACAAGCCCAATGATGCAGGAAAGGGTTTGGAGATCACCGTGGAATACAACGAGGTCATTGTGGACATGTTCAATGGCATCAAATTTAAATGGGACTTTGTATGTAGGGGGACTCCGTTCAAAAGTTTCAGCAATCCAAGAGGCCAATCAGAAATTCGATCATTGGAGCTGAGTTTCCACAAGAAACACAAGGAGTTGGTACTAACGTCATACATTCCCTTCATTATGCAAAAAGCAAAATTAATGAAGCAAGAAGCGAGGGGCCTGAGGATCTTTACACTGAATCGCCACGGCCTAAACAATGGTCTGAAAGACTTGTGGATGCCAATGAACCTAGACCATCCGGCGACATTTGAGACGCTGGCATTAGACCCAGACATTAAGAAATTCATTTTGGAGGATTTGGAGAGGTTTGTGAGGAGGAAAGAGTATTACAGAAAGGTAGGCAAGGCATGGAAGAGAGGGTATTTATTGTATGGCCCTCCTGGAACGGGGAAATCAAGCTTGATCGGGGCAATGTCAAATTATTTACATTTTGACATATACGACTTGGAGCTGACGGCTTTACATAGCAATTCAGAGCTTCGGCAACTAATGCTTGCTATGGCCAATAGGTCCATTATCGTCGTGGAAGACATTGACTGCACCATTGCATTCCAAAATCGCATGGCTGATTATTCAAGTTACTCTCGAGAACTGAGTGTGACGTTGTCGGGGCTGTTGAACTTCCTTGACGGTCTGTGGTCAAGCTGTGGGGATGAGAGGATCATAGTGTTCACAACCAATCGCAAAGAGAAGATTGACCCGGCATTGTTGCGTCCTGGTCGTATGGACGTTCACGTCCACATGTCATATTGCACTCCTCCTGTGTTTAGGCAGCTTGCTTTTAATTACCTTCAACTTCAACACCGCCCTCTTTTCCAACAAATCGAAGAAGCCATCCTTGCCACCCACGTCACTCCTGCTCAAGTGGCCGAGGAGCTCTTGAAGATGGAGGGTAGTGATCTTCCCTCTTCTCTTCAAGACCTTTTGCATTTTCTTGAACAAAAAAAGATCGAGAATGAAGAGCTTGAAGCTAAAAAAGTGGTCTCAAGCAAGAAAAGTAATCGTAAAAAAGTCCCATGA 1425 0.4484 MDFFSFSSLETNLAIAKPLVSKAGSVITTIVLIRSVVRDVLPREIRNCLFSGIRGIFNHLSSQLTIVIDEIDGLITNQIYDAAQTYLGKNISPSTRRIEVNKPNDAGKGLEITVEYNEVIVDMFNGIKFKWDFVCRGTPFKSFSNPRGQSEIRSLELSFHKKHKELVLTSYIPFIMQKAKLMKQEARGLRIFTLNRHGLNNGLKDLWMPMNLDHPATFETLALDPDIKKFILEDLERFVRRKEYYRKVGKAWKRGYLLYGPPGTGKSSLIGAMSNYLHFDIYDLELTALHSNSELRQLMLAMANRSIIVVEDIDCTIAFQNRMADYSSYSRELSVTLSGLLNFLDGLWSSCGDERIIVFTTNRKEKIDPALLRPGRMDVHVHMSYCTPPVFRQLAFNYLQLQHRPLFQQIEEAILATHVTPAQVAEELLKMEGSDLPSSLQDLLHFLEQKKIENEELEAKKVVSSKKSNRKKVP 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00740 474 Pfam ATPase family associated with various cellular activities (AAA) 257 384 IPR003959 GO:0005524|GO:0016887
Accr1g00740 474 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 429 IPR027417 -
Accr1g00740 474 CDD RecA-like_BCS1 231 383 - -
Accr1g00740 474 Coils Coil 440 467 - -
Accr1g00740 474 Pfam Domain associated at C-terminal with AAA 41 135 IPR025753 -
Accr1g00740 474 Gene3D - 207 381 IPR027417 -
Accr1g00740 474 PANTHER BCS1 AAA-TYPE ATPASE 21 455 - -
Accr1g00740 474 ProSitePatterns AAA-protein family signature. 355 373 IPR003960 GO:0005524|GO:0016887
Accr1g00740 474 SMART AAA_5 252 387 IPR003593 GO:0016887
Accr1g00740 474 Gene3D - 382 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00740 Accr-Chr1 15530785 15532306 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00740 254 418 Calmodulin-binding Proteins AT3G56690 25.714 1.18e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00740 - K08900 qsu:112035142 561.607