Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00733 ATGCCAAGCCGATCAACCGGAACCATAACGCAAGACTGGGAACCGGTGGTTCTGCACAAGAACAGACCTAAGGCCCAGGACCTGCGCAACCAGAAGGCCGTGAATCAGGCACTCCGATCGGGAGCTGAGGTCCAGACGATCAAGAAGCACGACGCCGGAGCGAATAAGAAAAACGCTCCGGTCGTCTACGCGAGGAAGCTTGATGAAGAGACCGAGCCGGCGGCTCTGGAGAAGGTAAGACCAGAGGTGAGGATGGTCATACAGAAGGCTAGATTGGAGAAGAAGATGAGCCAGGCGGATCTTGCGAAGCAGATCAACGAGCGGCCTCAGGTGGTTCAGGAGTACGAGAACGGGAAAGCAGTTCCGAATCAGGCCGTGCTGGCGAAGATGGAAAGAGTTCTCGGCGTGAAACTCAGAGGAAAGATCGGCGGCAAGTGA 438 0.5616 MPSRSTGTITQDWEPVVLHKNRPKAQDLRNQKAVNQALRSGAEVQTIKKHDAGANKKNAPVVYARKLDEETEPAALEKVRPEVRMVIQKARLEKKMSQADLAKQINERPQVVQEYENGKAVPNQAVLAKMERVLGVKLRGKIGGK 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00733 145 Coils Coil 87 107 - -
Accr1g00733 145 Gene3D - 72 145 IPR010982 GO:0003677
Accr1g00733 145 Pfam Helix-turn-helix 87 138 IPR001387 -
Accr1g00733 145 SMART mbf_short4 86 141 IPR001387 -
Accr1g00733 145 FunFam Multiprotein bridging factor 1 71 144 - -
Accr1g00733 145 CDD HTH_XRE 87 138 IPR001387 -
Accr1g00733 145 ProSiteProfiles Cro/C1-type HTH domain profile. 87 141 IPR001387 -
Accr1g00733 145 PANTHER ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1 11 141 - -
Accr1g00733 145 Pfam Multiprotein bridging factor 1 11 79 IPR013729 -
Accr1g00733 145 SUPERFAMILY lambda repressor-like DNA-binding domains 84 138 IPR010982 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00733 Accr-Chr1 15376691 15377128 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MBF1 Accr1g00733 MBF1 9e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00733 K03627 - qsa:O6P43_004045 234.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g00733 1 15376691 15377128 Accr1g00733 1 15376691 15377128 ECH