Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00729 ATGGATCCAAACACCAACAATTCCATGAGCCCCAAAGGCGGAGTGGCCTCCCCCACAGAAATGAACAGCCGGCATGGCGTGAACTTCTCGGCGCCGAGGGGGTTCATGACGAAACTAAAGTCGGCAGCTAAAGAGACGCTGTTCCCGGACGACCCTTTCCGGCAGTTCATGAACGGAGAGACGCGGAGAGATAGAATTGTGAAAGGATTTCAGTACTTTGTCCCATTATTCGAATGGCTTCCGAACTACAATTTCCGGCTGTTCTGGTCTGACCTCGTCGCCGGCCTCACCATCACCAGCCTCGCCATCCCTCAAGGCATTAGCTACGCTAAACTCGCCGAGATTCCTCCTGTCATTGGCCTCTATAGCAGTTTTGTGCCACCACTGATGTATGCGATATTCGGAAGTTCAAGGCACATGGCGGTGGGGACGATAGCGGCGGCGTCGCTGCTGTTATCGCAAACGGTGTCGAGCGTGGTGAAGCCGGAGGATGACCCTACGTTGTTTTTGCACTTGATTTTCACCGCCACCTTCATCACCGGCGTATTTCAGGCCGCGCTAGGTATTCTAAGGCTGGGGATATTGGTGGATTTCTTTTCGCATTCGACGATAACAGGGTTCATGGGAGGGACAGCCGTAATACTGTGTCTGCAACAACTGAAGGGCGTATTTGGAATGAAACATTTCTCTAGTCACACCAGTCTCATCTCTGTGGTCAAGGCCATCATAGCCAATAGCAGTGAGATAAGATGGCAGACCACAGTTATGGGCATCGTCTTCGTTGCTTTCTTGATGGCAACCAAGTATGTGAAAAAGAAAAATGAAAAGCTGTTTTGGGTGGCAGCAATCGCTCCAATAACAACAGTGATCGTAGGAGCTGTGTTCACTTACATTGTGAAAGGCCAAAATCACGGAATTCAAATTGTGGGTCACCTAGATCGAGGCGTAAATCCTTTATCCATCCACCTACTAAACTTTGATTCCAAATATTTGCCAGCCGTCCTAAAAGCAGGCATTATCACAGGCGTTTTGTCATTGGCGGAAGGTATAGCAATAGGAAGAAGCTTCGCTGTTGTCGAAAATACCCCTCATGATGGCAACAAGGAGATGGTCGCATTTGGTCTTATGAACCTCATGGGCTCCTTCACTTCATGCTACTTGACCAGTGGTCCATTTTCGAAGAGTGCAGTGAATTACAACGCAGGGGCGAAGACACAGATGTCAAACGCAGTGCAAGCGGTGTTAATGGCGATGACGCTATTATTTCTGGCTCCATTGTTTGGTCGCACTCCTCTGGTGGCTCTCTCAGCCATTATCATATCAGCCATGTTGCCTCTCATTGATTATGAAGAAGCCATCCATCTGTTCAAGGTCGACAAGTTTGACTTCCTCATTTGCATCTCTTGCTTCTTAGGCGTCACCTTCATCTCCATGGACGTCGGCCTCTTCTTCTCTATTGGACTAGGGTTGTTGAGAGGACTGTTGTACGTGGCAAGACCAGCCGCATGCAAGCTTGGGAAGATGCCCAACTCATCTGATCTGTATAGAGACGTTGAGCAGTATCCTGTTTCAACTGTATTCCCAGGTGTTCTCATCGTTCAACTCGGTTCTCCTATCTACTTCGCGAACTCTTCCTACATCAAAGAGAGGGTCAGGAGGTATATTCAAAGCGAGGAGAATTCCGGTAATATTATAGAGCGGGTCATACTCGATTTATCAAGCGTGACTTCCATTGATGTAACTGCTATTGGAGGAATATTAGAGCTACGTAAAATCATGGGCAAAAATGGAAAGGAGATGTCAATAGTGAACCCAAGGAAGGAGGTGATGGAGAAGCTGATAATATCAAGGTTTGTAGAAGTGGTTGGCAAAGAGACCTTCTTTTTGAGTTTGGATGATGCTGTGGCCGCTTCTCAGTTTCGTATATCCAAGGCAGATCCTTGA 1944 0.4779 MDPNTNNSMSPKGGVASPTEMNSRHGVNFSAPRGFMTKLKSAAKETLFPDDPFRQFMNGETRRDRIVKGFQYFVPLFEWLPNYNFRLFWSDLVAGLTITSLAIPQGISYAKLAEIPPVIGLYSSFVPPLMYAIFGSSRHMAVGTIAAASLLLSQTVSSVVKPEDDPTLFLHLIFTATFITGVFQAALGILRLGILVDFFSHSTITGFMGGTAVILCLQQLKGVFGMKHFSSHTSLISVVKAIIANSSEIRWQTTVMGIVFVAFLMATKYVKKKNEKLFWVAAIAPITTVIVGAVFTYIVKGQNHGIQIVGHLDRGVNPLSIHLLNFDSKYLPAVLKAGIITGVLSLAEGIAIGRSFAVVENTPHDGNKEMVAFGLMNLMGSFTSCYLTSGPFSKSAVNYNAGAKTQMSNAVQAVLMAMTLLFLAPLFGRTPLVALSAIIISAMLPLIDYEEAIHLFKVDKFDFLICISCFLGVTFISMDVGLFFSIGLGLLRGLLYVARPAACKLGKMPNSSDLYRDVEQYPVSTVFPGVLIVQLGSPIYFANSSYIKERVRRYIQSEENSGNIIERVILDLSSVTSIDVTAIGGILELRKIMGKNGKEMSIVNPRKEVMEKLIISRFVEVVGKETFFLSLDDAVAASQFRISKADP 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00729 647 ProSitePatterns SLC26A transporters signature. 117 138 IPR018045 GO:0008271|GO:0008272
Accr1g00729 647 PANTHER SULFATE TRANSPORTER 37 638 IPR001902 GO:0016020|GO:0055085
Accr1g00729 647 ProSiteProfiles STAS domain profile. 520 638 IPR002645 -
Accr1g00729 647 SUPERFAMILY SpoIIaa-like 524 637 IPR036513 -
Accr1g00729 647 CDD STAS_SulP_like_sulfate_transporter 521 631 - -
Accr1g00729 647 NCBIfam sulfate permease 75 634 IPR001902 GO:0016020|GO:0055085
Accr1g00729 647 MobiDBLite consensus disorder prediction 1 23 - -
Accr1g00729 647 Pfam Sulfate permease family 88 467 IPR011547 GO:0016020
Accr1g00729 647 Gene3D STAS domain 499 641 IPR036513 -
Accr1g00729 647 Pfam STAS domain 522 634 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00729 Accr-Chr1 15269342 15275317 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00729 5 647 Inorganic Solute Cotransporters AT5G19600 58.787 0.0 779
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00729 K17471 - qsa:O6P43_007946 885.174