Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00727 ATGGATCCAAACACCGACAATTCCATGAGCCCCAAAGGCGGAGTTGCCTCCCCCACAGATATCAACAGCCGGCATGGCGTGAACTTCTCGGCGCCGAGGGGCTTCATGACGAAACTAAAGTCGGCAGCTAAAGAGACGCTGTTCCCGGACGACCCTTTCCGGCAGTTCATGAACGGAGAGAGGCGGAGAGATAGAATTGTGAAAGGATTTCAGTACTTTGTCCCATTGTTCGAATGGCTTCCGAACTACAATCTCCGGCTGTTCTGGTCGGACCTCGTCGCCGGCCTCACCATCACCAGCCTCGCCATCCCTCAAGGCATTAGCTACGCCAAACTCGCCGAGATTCCTCCCGTCGTTGGCCTCTATAGCAGCTTTGTGCCACCACTGATATATGCGATATTCGGAAGTTCAAGGCACATGGCGGTGGGGACGATAGCGGCGGCGTCGCTGCTGTTATTCCAAACGGTTTCGAGCGTGGTGAAGCCGGAGGATGACCCTACGTTGTTTTTGCACTTGATTTTCACCACCACCTTCATCACCGGTGTATTGCAGACCACTCTAGGCATTCTAAGGCTGGGGATATTGGTGGATTTCTTTTCGCATTCGACGATAACAGGGTTCATGGGAGGGACAGCCGTAATACTGTGTCTGCAGCAACTGAAGGGCGTATTTGGAATGAAACATTTCACTAGTCAGACCAGTCTCATCTCTGTGGTCAAAGCCATCATAGCCAATGGCAGTGAGAAAAAGAAAAATGAAAAGCTGTTTTGGGTGGCAGCAATCGCTCCAATAACAACAGTGATCGTAGGAGCTGTGTTCACTTACATTGTGAAAGGCCAAAATCACGGAATTCAAATTGTGGGTCACCTAGATCGAGGCGTAAATCCTTTATCCATCCACTTACTAAACTTTGATTCCAAATATTTGCCAGCCGTCCTAAAAGCGGGCATTATCACAGGCGTTTTGTCATTAGCGGAAGGTATAGCAATAGGAAGAAGCTTCGCTGTTGTCGAAAATACCCCTCATGATGGCAACAAGGAGATGGTCGCATTTGGTCTTATGAACCTTATGGGCTCCTTCACTTCATGCTACTTGACCAGTGGTCCATTTTCGAAGAGTGCAGTGAATTACAATGCAGGGGCGAAGACACAGATGTCAAACGCAGTGCAAGCGGTGTTAATGGCGATGACGCTATTATTTCTGGCTCCATTGTTTGGTCGCACTCCTCTGGTGGCTCTCTCAGCCATTATCATATCGGCCATGTTGCCTCTCATTGATTATGAAGAAGCCATCCATCTGTTCAAGGTCGACAAGTTTGACTTCCTCATTTGCATCTCCTGCTTCTTGGGCGTCACCTTCATCTCCATGGACGTCGGCCTCTTCTTCTCTATTGGACTAGGGTTGTTGAGAGGACTGTTATACGTGGCAAGACCAGCCGCATGCAAGCTTGGGAAGATGCCTAACTCGTCTGATCTGTATAGAGACGTTGAGCAGTATCCTGTTTCAACTGTCTTCCCAGGTGTTCTCATCGTTAAACTTGGTTCTCCTATCTACTTCGCTAACTCTTCCTACATCAAAGAGAGGATCAAGAGGTATATACAAAGCGAGGAGAGTTCCGGTAATATTATAGAGCGGGTCATACTCGATTTAGCAAGCGTGACTTCCATTGATGTAACTGCTATTGGAGGAATATTAGAGCTACGTAAAATCCTGGGAAAAAATGGAAAGGAGATGTCAATAGTAAACCCAAGGAAGGAGGTGATGGAGAAGCTGATATTATCAAGGTTTGAAGAAGTGGTTGGCAAAGAGACCTTCTTTTTGAGTTTGGATGATGCTGTGGCCGCTTCTCAGTTTCGTTTATCCAAGGCAGATCCTTGA 1878 0.4776 MDPNTDNSMSPKGGVASPTDINSRHGVNFSAPRGFMTKLKSAAKETLFPDDPFRQFMNGERRRDRIVKGFQYFVPLFEWLPNYNLRLFWSDLVAGLTITSLAIPQGISYAKLAEIPPVVGLYSSFVPPLIYAIFGSSRHMAVGTIAAASLLLFQTVSSVVKPEDDPTLFLHLIFTTTFITGVLQTTLGILRLGILVDFFSHSTITGFMGGTAVILCLQQLKGVFGMKHFTSQTSLISVVKAIIANGSEKKKNEKLFWVAAIAPITTVIVGAVFTYIVKGQNHGIQIVGHLDRGVNPLSIHLLNFDSKYLPAVLKAGIITGVLSLAEGIAIGRSFAVVENTPHDGNKEMVAFGLMNLMGSFTSCYLTSGPFSKSAVNYNAGAKTQMSNAVQAVLMAMTLLFLAPLFGRTPLVALSAIIISAMLPLIDYEEAIHLFKVDKFDFLICISCFLGVTFISMDVGLFFSIGLGLLRGLLYVARPAACKLGKMPNSSDLYRDVEQYPVSTVFPGVLIVKLGSPIYFANSSYIKERIKRYIQSEESSGNIIERVILDLASVTSIDVTAIGGILELRKILGKNGKEMSIVNPRKEVMEKLILSRFEEVVGKETFFLSLDDAVAASQFRLSKADP 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00727 625 Pfam Sulfate permease family 88 245 IPR011547 GO:0016020
Accr1g00727 625 Pfam Sulfate permease family 250 445 IPR011547 GO:0016020
Accr1g00727 625 SUPERFAMILY SpoIIaa-like 502 615 IPR036513 -
Accr1g00727 625 MobiDBLite consensus disorder prediction 1 26 - -
Accr1g00727 625 ProSiteProfiles STAS domain profile. 498 616 IPR002645 -
Accr1g00727 625 CDD STAS_SulP_like_sulfate_transporter 499 609 - -
Accr1g00727 625 ProSitePatterns SLC26A transporters signature. 117 138 IPR018045 GO:0008271|GO:0008272
Accr1g00727 625 MobiDBLite consensus disorder prediction 1 29 - -
Accr1g00727 625 Pfam STAS domain 500 612 IPR002645 -
Accr1g00727 625 PANTHER SULFATE TRANSPORTER 37 616 IPR001902 GO:0016020|GO:0055085
Accr1g00727 625 Gene3D STAS domain 477 619 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00727 Accr-Chr1 15217761 15224539 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00727 5 625 Inorganic Solute Cotransporters AT5G19600 57.076 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00727 K17471 - qsa:O6P43_007946 838.95