Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00726 ATGAAGAAGATTTATTTCTCTCTTCTTCTCATTGCCTTCTTCTTAGGCGCAATCTCTATTCCTGCCGCCGCCGATGTCCCCATTGCCAGCCATGGAGCTCTCACTGACGCCGAGGTCATGTATATCAAGCAACGTCAACTTCTTTACTACAGAGATGAGTTCGGGGATAGAGGTGAAGAAGTCACCGTCGATCCTTCTCTAGTTTTCGAGAATAATCGCATTAGAGATGCTTATAAAGCTTTACAAGCTTGGAAGCAAGCCATTCTTTCCGATCCGCAGAATTGTACGCTCAATTGGGTTGGTAGCAATGTCTGTAACTATAGTAACGTTTTCTGTGCTCAGGCGTTGGACAACCCTAAGATTCGTACGGTTGCCGGCATTGATCTCAACCACTGTGACATTGCTGGGTACTTGCCAGAAGAACTTGGACTACTCACGGATCTTGCTCTCCTCCACATCAACACGAATAGGTTCTGTGGTACTGTTCCTCACAAGTTTGATAGACTGAAACTTTTGTTTGAGCTGGATATCAGTAACAATAGGTTCGCTGGGAAGTTCCCTACGGTGGTTCTTAAGCTTCCCACTCTGAAGTTCTTGGATCTGAGATTTAATGAATTTGAAGGGACAGTGCCTAGAGAGCTTTTTGACAAGGATCTGGACGCGATCTTCATAAACAACAATCGTTTTGTGTTCGATCTTCCTGACAATTTTGGGAACTCACCGGTGTCGGTCATTGTCGTCGCCAACAACAAGTTCCATGGCTGTCTCCCGGCGAGCTTGGGCAACATGACGAACCTGAACGAGATTATTCTGTTGAATAATGCCCTCCGTTCATGCTTGCCTTCAGAGATTGGGTTACTGAAGAACTTGACAGTGTTCGATGTGAGCTTCAATCAGCTGTTGGGTCCCTTGCCCGACACCATTGGAGGCATGGTGAGTCTTGAGCAGTTGAATGTAGCTCACAATTTGCTTTCTGGGAAGATTCCAGGGGGCATTTGTATGCTGCCAAATCTAAAGAACTTTACATTTTCATATAACTTCTTTACTGGTGAGCCACCGTCGTGCATCAGCTTGCCGTCGTTCGATGATCGGAGAAACTGCTTGCCGGCGAGGCCATTACAGCGCTCAGCGGCACAATGCAATGCTTTCTTGTCTAAGCCTGTGGACTGTAACTCGTTTAAATGTAAGCCATTTGTCCCGTCGCTTCCTCCACCTCCTAATCCTTCCCCTCCGATTCCGGTACCTTCCCCACCACCCGTGGTCGTACCTTCACGCTCTCCGCCTCCACCTCCGCTGTATTCACCCCCACCTCCGGTGTATTCGCCCCCTCCTCCGCCGCCCCCACCTCCGCCGGTTTATTCACCACCACCACCTCCACCAGTCTATCCACCTCCTCCTCCACCTCCACCACCTCCACCGTCTCCTCCCCCACCGTCACCTCCTCCGCCAGTATATTCTCCACCCCCGCCACCACCGTCACCTCCCCCTCCTTCACCACCACCACCATCACCACCCCCGCCAGTCTATTTACCACCACCTCCACCGTCACCTCCACCTCCTTCTCCATCTCCACCTCCACCGTCACCTCCACCTCCATCTCCTCCACCACCACCACCCACACCAACGCCACCATATTGCATCCGTCCTCCGCCGCCGCCGCCAAATTCACCCCCACCACCACCACCATCTCCTGTATTTTACCCGCCTCCAACTTACAGCTCGCCTCCGCCTCCTCATCACTCGCCTCCACCTCCTCCTCACTCCCCTCCACCTCCTCCTCACTCACCTCCGCCGCCTATTTATCCGTATTTATCTCCGCCACCTCCTCCTCCAGTCCACTCTCCTCCCCCCCCTGTCCATTCACCACCCCCACCATCTCCCCCACCTTGCATAGAACCACCTCCACCTCCACCACCTTGTGAAGAGCAGCCACCACCTTCTCCCACACCTTATTTACCCCCTCCATCCCCATCTCCCCCTCCACCACCAGCTGCTGTTCACTACACTTCACCACCGCCCCCTGTTTACTACAGTTCACCTCCGCCACCGCCGGTTCATTACAGTTCTCCCCCACCTCCAGAATACCATTCTCCACCAGTATACCATTCTCCTCCACCACCATCACCTCCGCCCTGTGAAGAAACACCGCCTTCTTCACCCCCACCTCCACCGGTCACATACAAAAACCCTCCACCTGCTCCTGTATATGAAGGGCCTTTGCCACCTGTCGTCGGAGTCTCTTACGCATCTCCACCTCCACCACCCTTCTATTGA 2274 0.5299 MKKIYFSLLLIAFFLGAISIPAAADVPIASHGALTDAEVMYIKQRQLLYYRDEFGDRGEEVTVDPSLVFENNRIRDAYKALQAWKQAILSDPQNCTLNWVGSNVCNYSNVFCAQALDNPKIRTVAGIDLNHCDIAGYLPEELGLLTDLALLHINTNRFCGTVPHKFDRLKLLFELDISNNRFAGKFPTVVLKLPTLKFLDLRFNEFEGTVPRELFDKDLDAIFINNNRFVFDLPDNFGNSPVSVIVVANNKFHGCLPASLGNMTNLNEIILLNNALRSCLPSEIGLLKNLTVFDVSFNQLLGPLPDTIGGMVSLEQLNVAHNLLSGKIPGGICMLPNLKNFTFSYNFFTGEPPSCISLPSFDDRRNCLPARPLQRSAAQCNAFLSKPVDCNSFKCKPFVPSLPPPPNPSPPIPVPSPPPVVVPSRSPPPPPLYSPPPPVYSPPPPPPPPPPVYSPPPPPPVYPPPPPPPPPPPSPPPPSPPPPVYSPPPPPPSPPPPSPPPPSPPPPVYLPPPPPSPPPPSPSPPPPSPPPPSPPPPPPTPTPPYCIRPPPPPPNSPPPPPPSPVFYPPPTYSSPPPPHHSPPPPPHSPPPPPHSPPPPIYPYLSPPPPPPVHSPPPPVHSPPPPSPPPCIEPPPPPPPCEEQPPPSPTPYLPPPSPSPPPPPAAVHYTSPPPPVYYSSPPPPPVHYSSPPPPEYHSPPVYHSPPPPSPPPCEETPPSSPPPPPVTYKNPPPAPVYEGPLPPVVGVSYASPPPPPFY 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00726 757 FunFam Leucine-rich repeat extensin-like protein 5 240 379 - -
Accr1g00726 757 SUPERFAMILY L domain-like 78 361 - -
Accr1g00726 757 Gene3D Ribonuclease Inhibitor 240 380 IPR032675 -
Accr1g00726 757 PRINTS Proline rich extensin signature 435 447 - -
Accr1g00726 757 PRINTS Proline rich extensin signature 448 469 - -
Accr1g00726 757 PRINTS Proline rich extensin signature 398 410 - -
Accr1g00726 757 PRINTS Proline rich extensin signature 415 431 - -
Accr1g00726 757 Gene3D Ribonuclease Inhibitor 77 239 IPR032675 -
Accr1g00726 757 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 14 609 - -
Accr1g00726 757 MobiDBLite consensus disorder prediction 439 744 - -
Accr1g00726 757 FunFam Leucine-rich repeat extensin-like protein 1 78 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00726 Accr-Chr1 15137202 15139475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00726 26 427 Leucine-rich Repeat extension Gene Families AT3G24480 72.208 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00726 - - qsa:O6P43_007947 657.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g00726 1 15137202 15139475 Accr1g00726 1 15137202 15139475 ECH