Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00722 ATGGATCTAGACGAAAAGTTCCTTTTTAAAGTTTCTGGTGTTCAAAGCCTTTCTTCCAGTGTGCAAAGCACTCCGGAAAAAAATGGTCATTTGGATGATGCTTCAAGAAGTCCTGAACTCCTTCAAGAGTTCTTGAAATCTGGTTCTAAGAAGGAACTTCTTCGAATGTGCTTTTATAAGGACAGAAAGAACATTTCATCCAAAAGAAAAATGCCAGAAACGAAGTCGACCAGTAAGGTTGTCAAGAAACAGGACAACAAAAAGGTCTCTACTCTCAGCAACCAGCCCCCTAGGAAGCAGCAGAGGAAGAGCAAAAACCCTACAAGGCTGAGGCCAGTTCCTGAACAGCTTGCTGATAGTGGACATTCAGACTCCTGGATCTGTAAAAACTCTGCTTGTAGAGCTTTTCTATCTGCAGATGAAAAATTTTGTAGAAGGTGCACTTGCTGTATTTGTCACCTATTTGATAGCAATAAGGATCCTAGTCTTTGGTTGGTATGCTCATCTGAATCTGATGAAGGTGACTCCTGTGGGTTCTCTTGCCATATTGAGTGTGCCCTTCAACATGAAAAAGTTGGAGTTGTTGATCATGGGCAACTGATGCAACTAGATGGTGGATATTGTTGTGCATCCTGTGGTAAAGTTACAGGGATACTTGGATGTTGGAAGAAGCAGCTAAATATAGCAAAAGATGCTCGGCGAGTTGACGTGCTCTGCTATAGGTTATATTTGAGTTACAAGGTCTTGGATGGGACTTCGAGGTTTAAAGAATTGCATGACATCGTAGTAGAGGCAAAAGCAAAGCTAGAAACAGAAGTTGGTCCAGTTAATGGCGTTTCTGCTAAGATGGTGCGAGGCATTGTCAGCAGACTCTCTATTGCTAGTGAGGTGCAGAAACTCTGCTCTCTTGCTATTGAGAAAGCTGATGGGTGGCCTTCCGTTGTGAATCCAGATTCCATAGATGGTTTGCTTCCTCCTGCCTGCAAATTTGTTTTCGAAGAGGTAACAGCTTCCTCAGTTAAAATCATTTTGATTGACAAGTCATCTTTTAAGGACATTAAGGGCTACAAGCTCTGGTACTACAAGAGTAATGAAGAGCTGCTTGCAAACGATCCTGTTTGTGAGGTCCCAAATAATCAGAAGAGGATTCTGTTATCCAACCTCCAGCCGGGCACAGAATATACTTTCCGCATTATATCTTACACAGATATGGGCCAGCTGGGTTATTCTGAAGCCAAGTGTTTCACCAAGAGTGCTGATCCAACTAAAACAGGTCCCTCTTCACTAATTGATTTAGGTCGTAAAAAAGAGAACCTTGAAATTGGAGCCAGTTCTTCTGGCTCCAAAACAGAGCCCAATCTTACAGTAGCAGATTCAGGATTTAAGGTTCGAGACCTTGGGAAAGTCGTGGGTCTTGGTTGGACTCAAGATCAAGGTCCCTTGGAAGGGTTTTGCGGTGTTGATATGAAAAATTGCTGCAAAGAAAGTGAAATGGTTAAGCCTAAACTTTCAGAAGAGCAGCCTGCAGTTTCACGGGGTCTTGATCTAAATGTTATTTCAGTGCCTGATCTAAATGAAGAACTAGTCCCTCCTTTTGAGTCTTCCAAGGATGAAGATAATGGCTGCACCTTGCAGAAGGCTGTTGAGGCAGACGATGATGCTGCTTCTCGGTTTGCGCAGAAAATCAGTTTGGCAAAATCTCATGGTAGTGGTGACTCCCATACCTGGATGAATGGGCCAACCGGAGAAGTTTCAGCTGTTGACTCCCGTGGAGATGCATGTAAGAAAAGGGCAGTGAGCACCAATGAAGACACACATGATTGCAATAGCACTTTGGCAAATGGTTCTCCTCTCAGAGTATCAGATGGCACATGCTCACTGGATGAAAACTATGAGTATTGTGTGAAAGTGTTTCGGTGGTTAGAATGTGAGGGTCACATCAAGCAGGAATTTCGGTTGAAGTTGCTAACTTGGTTTAGTTTGAGGTCAACAGAGCAGGAACGCAGGGTGGTCAATACCTTCATTCAAACTCTGCTTGATGATCCATGTAGTTTGGCAGGGCAATTGATTGACTCATTTTCTGATATCATATCCAACAAGAGGCCCAGAAATGCTTAG 2118 0.432 MDLDEKFLFKVSGVQSLSSSVQSTPEKNGHLDDASRSPELLQEFLKSGSKKELLRMCFYKDRKNISSKRKMPETKSTSKVVKKQDNKKVSTLSNQPPRKQQRKSKNPTRLRPVPEQLADSGHSDSWICKNSACRAFLSADEKFCRRCTCCICHLFDSNKDPSLWLVCSSESDEGDSCGFSCHIECALQHEKVGVVDHGQLMQLDGGYCCASCGKVTGILGCWKKQLNIAKDARRVDVLCYRLYLSYKVLDGTSRFKELHDIVVEAKAKLETEVGPVNGVSAKMVRGIVSRLSIASEVQKLCSLAIEKADGWPSVVNPDSIDGLLPPACKFVFEEVTASSVKIILIDKSSFKDIKGYKLWYYKSNEELLANDPVCEVPNNQKRILLSNLQPGTEYTFRIISYTDMGQLGYSEAKCFTKSADPTKTGPSSLIDLGRKKENLEIGASSSGSKTEPNLTVADSGFKVRDLGKVVGLGWTQDQGPLEGFCGVDMKNCCKESEMVKPKLSEEQPAVSRGLDLNVISVPDLNEELVPPFESSKDEDNGCTLQKAVEADDDAASRFAQKISLAKSHGSGDSHTWMNGPTGEVSAVDSRGDACKKRAVSTNEDTHDCNSTLANGSPLRVSDGTCSLDENYEYCVKVFRWLECEGHIKQEFRLKLLTWFSLRSTEQERRVVNTFIQTLLDDPCSLAGQLIDSFSDIISNKRPRNA 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00722 705 ProSiteProfiles Fibronectin type-III domain profile. 325 421 IPR003961 GO:0005515
Accr1g00722 705 MobiDBLite consensus disorder prediction 67 119 - -
Accr1g00722 705 MobiDBLite consensus disorder prediction 565 590 - -
Accr1g00722 705 PANTHER VIN3-LIKE PROTEIN 2-RELATED 17 704 IPR044514 GO:0010048|GO:0040029
Accr1g00722 705 MobiDBLite consensus disorder prediction 15 37 - -
Accr1g00722 705 CDD FN3 329 416 IPR003961 GO:0005515
Accr1g00722 705 MobiDBLite consensus disorder prediction 566 582 - -
Accr1g00722 705 Pfam Fibronectin type III domain 332 409 IPR003961 GO:0005515
Accr1g00722 705 MobiDBLite consensus disorder prediction 67 86 - -
Accr1g00722 705 MobiDBLite consensus disorder prediction 87 101 - -
Accr1g00722 705 Gene3D Immunoglobulins 324 428 IPR013783 -
Accr1g00722 705 Pfam PHD - plant homeodomain finger protein 128 246 IPR032881 -
Accr1g00722 705 SUPERFAMILY Fibronectin type III 333 423 IPR036116 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00722 Accr-Chr1 15040694 15047494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00722 125 705 PHD Gene Family AT3G24440 47.236 2.62e-169 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00722 - - gmx:100780157 1075.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g00722 1 15040694 15047494 Accr1g00722 1 15040694 15047494 ECH