Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g00697 ATGGCGATGGTAGCCAGAATTGTAATTATCTTTCTTCTCCTTATGCTTCTTCTGATCATCGTCGTCATCATTTTTGCCTGCAAACCGTGGCGCTTCTTTTCCTCTTCGCGACCCCGCTTACCCATCAAGGATGGTGATATAGAGAGGCCCCTAGTCTCAGATGATGCAAACGCTTTACGTAATCAGAGCGATGAATTTCAGCGAGACGATGATCTTGAGGGTGGTCCTTTTCACTCACCACTACCACATCGACTTGTTCATAAGCAAAGGCATCCTGCTTCTTCTCCTAATGTGCCTCAAGATGATAGTTTGATTTTAGATGTAACTTCTGATGCTCCAGAAGAAGTTGCATTTGGTCAAACACTTAAGCTTCCCCCAGAACAGTTAGCTGCAATTCAGAAGCATACTAGACTGAATCTTGAAGAGGATAGATTGGAAGACGCTGTGCAAAGAGATATCTTAGAAAAAAGAAGTTGCCTCACTTTGGAGGTTACTAGTGGTCCTTCTTGTGGAGCTCATTGTTCTGTACAATCAAAAAATCCTTCTCATCTACCTCTGACAATTGGAAGGGTTTCTCCAAGTGATTTACTGATCATGGACTCAGAAGTTTCAGGAAAGCACGCTCTAATAAATTGGAATTTAGATAAATTGAAATGGGAGTTGGTAGATATGGGTAGCCTAAATGGAACACTTTTGAATTCTCGGTCAATCAACCATCCAGACACTAGCAACAGGCGTTGGGGTGAGCCCTTTGAGATTGCCGATGGAGATATTATAACTCTTGGAACAACATCAAAAGTTGTTGTCCGTATTTCTTCTCAAGCTGAACATCAAATTCCGTTTGGAGTAGGTATGGCATCAGATCCCATGGCTTTGCGTCGAGGAGCGAAAAAGCTACCTATGGAAGATGTTTGCTATTATCAATGGCCTCTTCCTGGGCTGGATAAGTTTGGACTATTTGGCATCTGTGATGGGCATGGTGGAGATGCGGCTGCTAAATCTGCTAGCAAACTTTTCCCTGAAATAGTTGCTCGCATATTATCAGATTCATTAAAAAGAGAGAGGGTTTTATCACTACATGATGCATCTGATGTTCTTAGAGAGGCATTTTCTCAAACAGAAGCAAGCATGAATCACCACTATGAGGGATGTACAGCGACATTGCTTCTGGTGTGGGATGATGGTGATGAAAATTTCTATGCACAATGTGCTAATGTGGGAGACTCTTCCTGTGTTATGAATGTCAATGGGAAACAGATCAATATGACCATAGATCATAAGATAGCAAATTCTTCTGAAAGACTCCGAATTGAAGAGAGGGGTGAGCCACTGAAAGATGGTGAAACACGTCTATACGGTATAAATCTTGCAAGGATGCTTGGGGACAAATTTCTCAAGCAACAGGATTCCCGGTTTAGTTCAGAGCCTTATATAAGTCAAGCAGTGCATATTGATAAAACAAGCAGGGCTTTTGCCATTCTTGCTAGTGATGGCTTGTGGGATGTCATCAGCATGAAGAAGGCAATTCAGCTGGTGTCTCAGGTGAGAGACAGACACTCCTCACTTGGGGAGAATTCTGCAGAGAAGGTTGCTAATTTCTTGTTGGGTGAGGCTAGAACTCTCAGAACAAAGGATAATACTTCTGTAATTTTCTTAGATTTTGATAACATCGCCAAATACTCTTGTAAATCGGACTCCTAG 1701 0.4215 MAMVARIVIIFLLLMLLLIIVVIIFACKPWRFFSSSRPRLPIKDGDIERPLVSDDANALRNQSDEFQRDDDLEGGPFHSPLPHRLVHKQRHPASSPNVPQDDSLILDVTSDAPEEVAFGQTLKLPPEQLAAIQKHTRLNLEEDRLEDAVQRDILEKRSCLTLEVTSGPSCGAHCSVQSKNPSHLPLTIGRVSPSDLLIMDSEVSGKHALINWNLDKLKWELVDMGSLNGTLLNSRSINHPDTSNRRWGEPFEIADGDIITLGTTSKVVVRISSQAEHQIPFGVGMASDPMALRRGAKKLPMEDVCYYQWPLPGLDKFGLFGICDGHGGDAAAKSASKLFPEIVARILSDSLKRERVLSLHDASDVLREAFSQTEASMNHHYEGCTATLLLVWDDGDENFYAQCANVGDSSCVMNVNGKQINMTIDHKIANSSERLRIEERGEPLKDGETRLYGINLARMLGDKFLKQQDSRFSSEPYISQAVHIDKTSRAFAILASDGLWDVISMKKAIQLVSQVRDRHSSLGENSAEKVANFLLGEARTLRTKDNTSVIFLDFDNIAKYSCKSDS 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g00697 566 SMART FHA_2 185 237 IPR000253 GO:0005515
Accr1g00697 566 PANTHER PROTEIN PHOSPHATASE 2C 292 551 IPR015655 GO:0004722|GO:0006470
Accr1g00697 566 Gene3D - 291 564 IPR036457 -
Accr1g00697 566 CDD PP2Cc 294 554 IPR001932 -
Accr1g00697 566 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Accr1g00697 566 ProSiteProfiles PPM-type phosphatase domain profile. 282 554 IPR001932 -
Accr1g00697 566 ProSitePatterns PPM-type phosphatase domain signature. 319 327 IPR000222 GO:0043169
Accr1g00697 566 FunFam Protein phosphatase 2C 70 290 561 - -
Accr1g00697 566 SMART PP2C_4 276 552 IPR001932 -
Accr1g00697 566 Pfam FHA domain 187 262 IPR000253 GO:0005515
Accr1g00697 566 FunFam Protein phosphatase 2C 70 155 289 - -
Accr1g00697 566 SUPERFAMILY SMAD/FHA domain 159 270 IPR008984 GO:0005515
Accr1g00697 566 Pfam Protein phosphatase 2C 298 547 IPR001932 -
Accr1g00697 566 SUPERFAMILY PP2C-like 293 556 IPR036457 -
Accr1g00697 566 ProSiteProfiles Forkhead-associated (FHA) domain profile. 186 237 IPR000253 GO:0005515
Accr1g00697 566 Gene3D - 155 290 - -
Accr1g00697 566 CDD FHA_PP2C70-like 160 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g00697 Accr-Chr1 13598128 13606249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g00697 1 555 PP2C-type Phosphatase Gene Family AT5G19280 57.385 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g00697 K01090 - qsa:O6P43_003406 801.971